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SCN18_13_7_16_R1_B_scaffold_480_22

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(24940..26349)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003782AC8 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 470.0
  • Bit_score: 312
  • Evalue 4.10e-82
putative RNA-binding protein containing a PIN domain protein similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 470.0
  • Bit_score: 312
  • Evalue 1.20e-82
Putative RNA-binding protein containing a PIN domain protein {ECO:0000313|EMBL:AIJ25211.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 470.0
  • Bit_score: 312
  • Evalue 5.80e-82

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGACGAACGTGTATGACGCTGTTCCGCGCGATGCCGTTCCGGACCGTTCTGCACCGGAGACGCCGCCTCCCGACCAGCCGACCGGGCAACCGGACCCGCCGCCGGCCGTGACATGGGCGGACCTCCCCGAGACGGTGCGCACCGCGGCGATCGGTGCCGCGGCCCGCGTCATCGGAACGCTGCCCGCCGATCGGGTGCCGCACGCCTTGGCACAGGTCGCCCGGTTCGTTGACGCCAAACGCGCCAAGAGCGGGGCGGCACCGATCGCTCGCGCGTTGGAGCACGACGCCGGGTTCCGCGCCCTGGTCGCGGAAAGCCTCCCGGCGGACTTCGGCCGAGCGGACGCGGACCCGGCCGCCGCGGCGGCGCGGTCCTTCCTGCGGCACCTCCCGGATACCCGGCTCCTGCTCGCGGACGCCGCCCGCGCGGACGAGGTGGCGAGCCTCCGCGCGCAGGTCGCTGGGCTGACAGCGACCGTCGAGGGCCTGACGACCCAGCTTGCGAATACCGCCCGCGGCCGTGGCAAAGCCGGTTCTGCGGCGCCGGCGGTATCTGACGGGAAGTCCGGGAGGCAGCCCGGGGCGAAGGCCGATTCCGCCGACCAGGATGAGATCGCCAAATTGCGCGCGCGCCTGCGCCAGCAGGGCACCCGGGTTCGCGAGGCGCAATTATCGGCGGCCGACTCGGTGCGGCTCGCCGACGCGGAGCGGGACGAGGCCGTGGCGCAACTCGAGCGAGAACGCGCCAACGCCGACGCCTGGCGGCTCAAAGCGGAGCAGGAGGCCCGCCAGGCACAGACGGCGCGGCAGGCACTCGATCGGGCGCGCGCCGAGCTCAGCCGCGACCGGGCGGACGGTGATCGGCGCATCGAACTGCTGCTGGACACCCTCGTCGACGCCGCCGCGGGGCTGAGGCGGGAGTGGCGCCTGGCGACCGGAGGAGCGGATCCGGCCGACGTCGTGGTTCGGGACCTGCCGGCCGCCGACCCGCGGCCGCGGCGGCAAGCCGATGCCGCGCTGCTCCTGCAGTGGCTGGGTCTCCCCAGTGCGCATGTGATCGTCGACGGCTACAACGTGACGAAGACGGGATATCCGGATCTCACCCTCGCCGACCAGCGGGACCGGCTGATCCGCGCGCTCGGCGCTCTCGCGGCGCGTACCGGCGCCGACATCACCGTCGTTTTCGACGGAGCCGCGGTGGTCGCGGCGCCGACGTCGACCAGGGATGTACGGGTGGTCTTCTCGCCGCCGGGGGTGATCGCCGATGACGTCATTCGCCGGCTGGCCGCCGCGGAACCCGTCGGCAGGGTGGTGGTTGTCGTGACATCCGATCGTGAGGTGGTGGACGGTGTCCGCCGTTCGGGCGCACGAACCGCGCCGTCGCAGGTCCTGCTCGAGGTGCTCGCGTGA
PROTEIN sequence
Length: 470
MTNVYDAVPRDAVPDRSAPETPPPDQPTGQPDPPPAVTWADLPETVRTAAIGAAARVIGTLPADRVPHALAQVARFVDAKRAKSGAAPIARALEHDAGFRALVAESLPADFGRADADPAAAAARSFLRHLPDTRLLLADAARADEVASLRAQVAGLTATVEGLTTQLANTARGRGKAGSAAPAVSDGKSGRQPGAKADSADQDEIAKLRARLRQQGTRVREAQLSAADSVRLADAERDEAVAQLERERANADAWRLKAEQEARQAQTARQALDRARAELSRDRADGDRRIELLLDTLVDAAAGLRREWRLATGGADPADVVVRDLPAADPRPRRQADAALLLQWLGLPSAHVIVDGYNVTKTGYPDLTLADQRDRLIRALGALAARTGADITVVFDGAAVVAAPTSTRDVRVVFSPPGVIADDVIRRLAAAEPVGRVVVVVTSDREVVDGVRRSGARTAPSQVLLEVLA*