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SCN18_10_11_15_R5_P_scaffold_74_98

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(88904..89503)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4V573_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 193.0
  • Bit_score: 190
  • Evalue 1.30e-45
HTH-type transcriptional repressor ComR {ECO:0000313|EMBL:CEJ13726.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 190.0
  • Bit_score: 265
  • Evalue 4.50e-68
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 194.0
  • Bit_score: 188
  • Evalue 1.90e-45

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGGCGGGCGTCAGGCAGTTCGATGAGGAAACGGTACTGGCCGAGGCGCTGGCGTTGTTCTGGCGCCAGGGCGTGGCCGCGACCTCGATGCCGGATCTGGCCGCGGCGACCGGGGTGCAGCGCGGTTCACTCTACAATGCCTATGGCGACAAGGAAGCGATCTTCCTGCGCGCCTACGACCGCTATGCCGCGGGCCTGCTCGACCTCTGCCGCGCCAGTCTCGAGGGCGACGATGCCGGCCGGATACTGGCGCGCTTCTTCGAGACGATCATCGCCAACATGACGGCCGGCGCACCGCCGCGCGGCTGCCTGACGACGAAGACCGCGGCCGACGGCAGTCTGGCCAGCGCGACGATCCAGGCCCGGCTGCGCGACCTGCTCGACGGCATGACCGCCGCGGTCGCGGCCGCGCTGTCGCGCCCGGCGGTGCGCCGGCAACTGACCGTCGACCCGGCCCAGGCCGCGCTGGTGGTCGTCACCTTCACCCGCGGCATCGCGGTGATGGAACGGGTCTATGGCGACCGGCGGCAGCTGATGCGGGCGGCGGAAGGGTTGATCGCGGGGTTGGTCGCGCGGCCCCGCAAGGGGCGCGGCGCGTGA
PROTEIN sequence
Length: 200
VAGVRQFDEETVLAEALALFWRQGVAATSMPDLAAATGVQRGSLYNAYGDKEAIFLRAYDRYAAGLLDLCRASLEGDDAGRILARFFETIIANMTAGAPPRGCLTTKTAADGSLASATIQARLRDLLDGMTAAVAAALSRPAVRRQLTVDPAQAALVVVTFTRGIAVMERVYGDRRQLMRAAEGLIAGLVARPRKGRGA*