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SCN18_10_11_15_R5_P_scaffold_67_11

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 13657..14298

Top 3 Functional Annotations

Value Algorithm Source
Probable transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N946_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 205.0
  • Bit_score: 231
  • Evalue 7.20e-58
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 205.0
  • Bit_score: 231
  • Evalue 2.00e-58
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACF00427.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 205.0
  • Bit_score: 231
  • Evalue 1.00e-57

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGACCAGTTCTGCCACTGCGCCGACCCGTCGCCGCACCAGCCGCAGCGATGCCGCCGCCCGCCTGCTGGCGGCCGCATCGAGCTTGATGATCGAGCGCGGCTCGACCGAGATATCGCTGGGCGACATCTCCGAGCGCTCGGGCGTCAACTCGGCCCTGGTCAAATATCATTTCGGCAACAAGACCGGCCTTCTGGTCGCGCTGCTGGAACGCGACGCGCAATCGGCCATGGAACAGCTGAATGCCTTGCTGCGGGCGGACCTGTCGCCGACCGCCAAGCTGAAGCTGCATATCGCCGGCGTGGTCAATGCCTATTACCGCACCCCCTACCTGAACCGCCTGATCCACGACCTGCTGCACCAGTCGAGCGACGAGGTGGCCCGGCAGGTCGCCGACTTCTTCGTCGGCCCGGTCGTCGAGTTCGAGCGGCAGTTGCTGGCCGAAGGCATCAGGCGGGGCGAATTTCGCGACGTCGACCCGATGATCTTCTATTTCACGCTGTTCGGCGCGATCGACCACATGTTCTATGCGCGTCACACGCTGCTCTACGGCTTCGGCGTTTCCGAGGTCACCGAGGACATGCGCCGCAAACTGATCGATCTTGTCACGGAGATGGTGCTCGGCGCGATCAAGCCCGGCTGA
PROTEIN sequence
Length: 214
MTSSATAPTRRRTSRSDAAARLLAAASSLMIERGSTEISLGDISERSGVNSALVKYHFGNKTGLLVALLERDAQSAMEQLNALLRADLSPTAKLKLHIAGVVNAYYRTPYLNRLIHDLLHQSSDEVARQVADFFVGPVVEFERQLLAEGIRRGEFRDVDPMIFYFTLFGAIDHMFYARHTLLYGFGVSEVTEDMRRKLIDLVTEMVLGAIKPG*