ggKbase home page

SCN18_10_11_15_R5_P_scaffold_12_18

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 12843..13739

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=2 Tax=Labrenzia RepID=U7FXZ8_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 286.0
  • Bit_score: 224
  • Evalue 9.40e-56
Uncharacterized protein {ECO:0000313|EMBL:KKL62292.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 294.0
  • Bit_score: 225
  • Evalue 7.80e-56
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 294.0
  • Bit_score: 206
  • Evalue 9.80e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCATGCCGCGGTCCTGAAATACATCGTCGAGGTCGCGCGCCAGGGCTCGATCCGCAAGGCGGCGGCCGCCCTCGGCGTCGCGTCGTCGGGCATCAACCGGCAATTGCTGCGGCTGGAGGAAGAGCTGGGCGTGCGGCTTTTCGACCGGACGCCCGAGGGCGTCGCGCCGACCGATGCCGGCTGGCTGCTGATCAAGCATGCCAGCCAGACGCTGCAGGGCTTCGAGACCCTGCGCCCGCTGATCTCAGACGTGCGCGCCCTGCGTGCCGGCCATGTCAGCGTGGCCTGCATCGATTCGCTGAATTTCGCGGTGATGCCCGAGGTGCTGAGGCGTTTCCTGGCCCTGCATCCCAAGGTCGTCGTCACCATCCGCCAGGCCGCGCCCGACGCGGTGATCCAGGCGGTCGAGGATGGCCAGGCCGATATCGGACTGACGTTTACCCGATTTGCCCGTCAATCGGTGCGGCTGGCCGGCGACGCGCCGGCCCCGTTCGGCGCGGTCGTCCCGAATGGCCATCCGCTGGCCGCGTTCGACAGTATCGCGCTGGAAAGTTGCCTCGCCTACCCGATGGTCAAGCACTACGATCCCGACGGGCGGCACCTGTTCCTCGACGAGATCGCGCGCAGGGAAGCGCTCGACATCGACGCGGCCGTCCACACGAACTCGATGGTGCTGGCCAAGAACGTGATCGCGCAGGGCCACGCGATCGGGATCTATATCCGCTACAGCCTGATCCGCGAGATCGCCGCCCGCGAGATCGCTTTCGTGCCGCTGACCCATCCGACGCTGGCGGCGCATCGCATCGGCATCTACATCCCGGCCAACCGCAATATCAACTCGATCGAACGCAAGCTGGTGGAGATCGCCGCCGCCGTGCTGGCCGAGCATGGCTGA
PROTEIN sequence
Length: 299
MHAAVLKYIVEVARQGSIRKAAAALGVASSGINRQLLRLEEELGVRLFDRTPEGVAPTDAGWLLIKHASQTLQGFETLRPLISDVRALRAGHVSVACIDSLNFAVMPEVLRRFLALHPKVVVTIRQAAPDAVIQAVEDGQADIGLTFTRFARQSVRLAGDAPAPFGAVVPNGHPLAAFDSIALESCLAYPMVKHYDPDGRHLFLDEIARREALDIDAAVHTNSMVLAKNVIAQGHAIGIYIRYSLIREIAAREIAFVPLTHPTLAAHRIGIYIPANRNINSIERKLVEIAAAVLAEHG*