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SCN18_10_11_15_R5_P_scaffold_55_20

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 19413..19946

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HM03_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 172.0
  • Bit_score: 224
  • Evalue 7.30e-56
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 172.0
  • Bit_score: 224
  • Evalue 1.00e-55
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 172.0
  • Bit_score: 215
  • Evalue 9.60e-54

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Taxonomy

SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAATGCCCACATCCAGGCGATCGCCGCGACGCAGGACCGCAGCGCCTTCGCCGCGCTGTTCAGCCACTACGCACCGCGGGTGAAGGCGTATCTGATCCGACTTGGCTGCCCTGACGGGCAGGCCGAGGAACTGGCCCAGGAAACGATGCTGGCGGTATGGCGCAAGGCTGATCGCTTCGATCCGGCCAAGGCTGCGGCAGGTACCTGGATATTCACGATCGCCCGCAACCTTCGCATCGACCAGGTGCGGCGCGAACGGCGACCCGAGCTTGATCCGGACGATCCCGCGCTGGTGCCGGCCCCCGCACCTGAAGCAGATCTTGTCCTGCAAGCCAAACAGCACCACGTGCTGGTCCAGAACGCCCTTCAGGCATTGCCGCCCGACCAGGCCCGCGTGATCGCCTTGTCCTTCTTCGAGGACAAACCGCACGGCGAGATCGCAGGTGAACTCGGCCTGCCGCTGGGCACGGTGAAATCGCGCATCCGATTGGCCTTCGCCCGGCTGCGCGCGGCTCTTGAGCAGACGTCATGA
PROTEIN sequence
Length: 178
MNAHIQAIAATQDRSAFAALFSHYAPRVKAYLIRLGCPDGQAEELAQETMLAVWRKADRFDPAKAAAGTWIFTIARNLRIDQVRRERRPELDPDDPALVPAPAPEADLVLQAKQHHVLVQNALQALPPDQARVIALSFFEDKPHGEIAGELGLPLGTVKSRIRLAFARLRAALEQTS*