ggKbase home page

SCN18_10_11_15_R4_P_scaffold_164_11

Organism: SCN18_10_11_15_R4_P_Rhizobiales_68_13

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(10349..11242)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JH31_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 297.0
  • Bit_score: 439
  • Evalue 1.40e-120
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 297.0
  • Bit_score: 439
  • Evalue 4.00e-121
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI05993.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 297.0
  • Bit_score: 439
  • Evalue 2.00e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGTTCAACTGGAACGACCTGATCTTCTTCCTCGAACTGGCGCGGCAGGGCCGGCTGATGCCCGCCGCGCGGCGGCTGAAGGTGGACCACACGACGGTCTCCCGCCGCATCAGCGAGCTGGAGAAGGATCTTTCCCTCAAGCTGTTCGACCGCAAGCCCGACGGCTTCGTGCTGACCGAGCCGGGCCATCGCCTGTTTGCCGTCGCCGAGCGCATCGAGCAGGAGGCGGTGGGCGTCGAGGAGACACTTCAGGCCGCCCCCAGCGCGCCGCGCGGGCATGTGCGCGTCGCCTCCATGGAGGGCATCGGCGCCTTCTATCTCGCCGAGCGGTTCGCCGAACTGGCGGAGAAGGAGCCGGGGCTGGTGGTGGAGCTGGTCACCGAGCGCCATCTCATCAATCTCACGAAGCGCGAGGCGGACATCTCCATCTCCTTCGTGCCGCCGCAGGGCCAGCGCCTCGCTGTGCGTCGGCTCGGGGCCTTCCGCCTCGCTCTCTATGCGGCGCCGGACTATGTGCGGCGCTTCGGCATGCCGAGGACGCGGGCGGAACTGCCCTCCCACACCTTCGTGGACTATGTGGAGGATCTGGTCGCGATCCAGCCGGTGCATTGGCTTTTGGATGTGCTGGAGCCGCTGAAGGTGTCGTTCCGCTCCACCTCCATGCACGCCCAGCAGAATGCGGTGGCGCGCGGCGCCGGCATCGGCCTCCTGCCGCTGTTCTCGGCCAAGAGCAATCCGCGCCTTATTCCCATCCTCACCGACGAGGTGGTGGTCATGCGCGACATCTATGTGAGCGTCCACGAGGATCTGGAATTCATGGGCCGCTTCCGCGCCGTGCTCCAGCACCTCGCCGAGGTGGTGCAGCGGGACGCGGCCTATCTGACGGAATTCTGA
PROTEIN sequence
Length: 298
MFNWNDLIFFLELARQGRLMPAARRLKVDHTTVSRRISELEKDLSLKLFDRKPDGFVLTEPGHRLFAVAERIEQEAVGVEETLQAAPSAPRGHVRVASMEGIGAFYLAERFAELAEKEPGLVVELVTERHLINLTKREADISISFVPPQGQRLAVRRLGAFRLALYAAPDYVRRFGMPRTRAELPSHTFVDYVEDLVAIQPVHWLLDVLEPLKVSFRSTSMHAQQNAVARGAGIGLLPLFSAKSNPRLIPILTDEVVVMRDIYVSVHEDLEFMGRFRAVLQHLAEVVQRDAAYLTEF*