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SCN18_10_11_15_R4_P_scaffold_489_21

Organism: SCN18_10_11_15_R4_P_Reyranella_68_349

near complete RP 40 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(25303..25944)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369AE65 similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 209.0
  • Bit_score: 206
  • Evalue 1.90e-50
gntR; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 216.0
  • Bit_score: 182
  • Evalue 1.10e-43
Transcriptional regulator {ECO:0000313|EMBL:BAF88481.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 216.0
  • Bit_score: 182
  • Evalue 5.40e-43

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGACGGTCTAGTCACCGACCCCAAGCTGTCGACGGTCGCCTATGGCGCGCTGCTGGACATGATCCTGCGCGGCACCATCGCGCCGGGCGAGCTCGTGACCGAGCGCCAGATCGCGGCGCGTCTCGGCATGTCGCGCACGCCGGTGCGCGAGGCGGTGCGGCGGCTGGAAGGCGAGGGCACGCTCGAGCGCCAGCGCGATGGCGCGCTGATCGTGCGGCCCTATTCGATGGAGGAGTTCCTGCAGGCGCTCGCGGTGCGGCGGTTGCTGGAAGGCGAAGCGGCACGGCTCGCCGCCGGCAAGGTCTCGCCTGCGGTCCTTGCGGCGGCGCGCGAGCGCACCGAGCGGCTGCGGCGCGACGGCATGGCTGAATCGGCGCGCCAGGACGATCGCGACTTCCATGCCGCGATCGCCGAGGCCTCGGGCAACCCGGTGCTGGCGACCACGATCTCCGACCTGCGCAAGCGCACCGCGATGTTCCGGCTCGGCCGCCTGCCCGAGCGGGTCGACCAGGTGTGCGACGAGCACCTGACAATTCTTGACGCCCTGGCCAGCGGCGACGGCGAGGCTGCCCGCACGGCCATGCAGAGCCATATCGACAACGTCCGGGCCCACCTGCTGCAGCGTCTGACGGCGCTCTGA
PROTEIN sequence
Length: 214
MDGLVTDPKLSTVAYGALLDMILRGTIAPGELVTERQIAARLGMSRTPVREAVRRLEGEGTLERQRDGALIVRPYSMEEFLQALAVRRLLEGEAARLAAGKVSPAVLAAARERTERLRRDGMAESARQDDRDFHAAIAEASGNPVLATTISDLRKRTAMFRLGRLPERVDQVCDEHLTILDALASGDGEAARTAMQSHIDNVRAHLLQRLTAL*