ggKbase home page

SCN18_30_10_14_R3_B_scaffold_719_20

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(18021..19529)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JGQ1_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 500.0
  • Bit_score: 792
  • Evalue 2.50e-226
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 500.0
  • Bit_score: 792
  • Evalue 7.10e-227
Putative transmembrane protein {ECO:0000313|EMBL:AEI06049.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 500.0
  • Bit_score: 792
  • Evalue 3.50e-226

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGACCGATATTTTCGCACAGCTCGGCGTCGGCTTCCTTCACTGCATGACACCGGCCAATCTGGTGATGCTTGTCATCGGCATCACCCTCGGTCTGCTGGTCGGTGTTCTGCCCGGTCTCACTTTGGTCATGGGTGTCGCGCTGGCGCTGCCGTTCACCTACAAAATGGATGTCACCGCCTCGATCGTGCTGCTGACCGCGATGTACATCGCCGGCACTTATGGCGGCGCGTTCACGGCCATCCTGTTTCGAATACCCGGCGAGCCGATCGATGTCCCGATGCTGTGGGACGGCTATACGATGGGACGCAACGGTCATGCGGCAAAGGCGCTCGGCTGGACGCTGATGGCGGCGCTGATCGGCGGCGTGATTTCCGGCGTGATCATGGTGCTGATGACGCAGCCGCTGGCGAAATTTGCGCTCCGACTCTCATCGCCGGAATATTTCGCCATTCTGTTGTTCGGTCTCAGTAGTGTCGTCGCGTTGGGGCGTGGCGCGCTGGCCAATGCGCTGATCAGCCTCAGCGTCGGGTTGTTGATCGGTGCGGTCGGCACCGATCCGATCTATGGCGCTTATCGCTTCACCTTCGGCTCCTCGCTGCTGACCGACGGCATCGAGTTCCTGGTGGTGATGGTCGGCGCCTACGGCGTCGGTGAAGTGTTGACCCGTCTCGAAGCCGGATTTGCGACCAAGCCGGTCGAGCAGATTTCCGGCGCGCGCACCCAACTGCCCAGCGCCAGGGAGATGCTGGCGCTCAAGGTACCGTTCCTGCGCTCGAGCCTGCTCGGGAACATCATCGGGATCATTCCCGGCGCGGGCGCCACCATTGCTTCGTTCGTCAGTTACGGCGTCGAGGCGCAGTTCGGCAAACGCTCGAAGGAGATGGGCACCGGCGTTGCCGAAGGCATCGTTGCGCCGCAGGCTGCTGCGACGGCCTCGGTTGGCGGCGCGCTGGTGCCGCTGCTTGCTCTTGGTATTCCCGGCAGCGGTGCGACCGCGATCATCCTCGGCGCCTTCATGCTCCACGGCATCCAGCCCGGCCCGCAGATTCTGGTGACGTCGTCCGCCATGGTCTACACGGTGTTCGCTTCGCTGTTCCTCGGCCTCGCGCTGATGTGCCTGATCGGCTATTTCGCCATTCGCTTTCTGGTCAAGATTCTCGATTTTCCCGAAGCCGTGGTCTCGGCTTACGTGCTGATCCTGTGCTTCATCGGTGCGCTGTCGATCCGCAACAGCGTGGTAGATCTCTGGCTGATGATCGGGTTCGGCATTCTCGGCTACCTGTTCGAGCGTCTGAAATTTCCTGTCGCTCCGCTCGTGCTCGGGGTCATCCTTGGGCCGCTCGCCGAAGAATCGTTCATGAATTCGATGATCAGCTTCTCCAACGACTGGACGGTCTTCTTCACCCGGCCGATGGCGGGCGGGATCATGGCATTGACGGCGGTCGTGCTCGCGCTGCCCTTCATCCAGAAGTGGTGGATCGGCCGCAGGCGCGCCGTTCTGGGCTGA
PROTEIN sequence
Length: 503
MTDIFAQLGVGFLHCMTPANLVMLVIGITLGLLVGVLPGLTLVMGVALALPFTYKMDVTASIVLLTAMYIAGTYGGAFTAILFRIPGEPIDVPMLWDGYTMGRNGHAAKALGWTLMAALIGGVISGVIMVLMTQPLAKFALRLSSPEYFAILLFGLSSVVALGRGALANALISLSVGLLIGAVGTDPIYGAYRFTFGSSLLTDGIEFLVVMVGAYGVGEVLTRLEAGFATKPVEQISGARTQLPSAREMLALKVPFLRSSLLGNIIGIIPGAGATIASFVSYGVEAQFGKRSKEMGTGVAEGIVAPQAAATASVGGALVPLLALGIPGSGATAIILGAFMLHGIQPGPQILVTSSAMVYTVFASLFLGLALMCLIGYFAIRFLVKILDFPEAVVSAYVLILCFIGALSIRNSVVDLWLMIGFGILGYLFERLKFPVAPLVLGVILGPLAEESFMNSMISFSNDWTVFFTRPMAGGIMALTAVVLALPFIQKWWIGRRRAVLG*