ggKbase home page

SCN18_30_10_14_R3_B_scaffold_800_31

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(26072..27247)

Top 3 Functional Annotations

Value Algorithm Source
portal protein n=1 Tax=Afipia birgiae RepID=UPI0002DEA371 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 391.0
  • Bit_score: 690
  • Evalue 6.10e-196
phage portal protein, HK97 family similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 391.0
  • Bit_score: 678
  • Evalue 8.90e-193
Phage portal protein {ECO:0000313|EMBL:AEI06173.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 391.0
  • Bit_score: 678
  • Evalue 4.40e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGCTCAACCGCTTCAAATACCTCTTCACCGCCCCCGAATCCAAAGCCTCGCGCACGGCGAAGGTGCTGGCGTTCGAATCTGGCGGGCGGGCGCGGTGGACGCCGCGCGATTATGCGGCGCTGGCGCGCGAGGGCTATCTTGCCAACGCCATCGTGCATCGCGCGGTGCGGCTGATCGCGGAGAACGCGGCCTCGTGCGGCTTCCTGCTCTACGAAGGCGCGCTGGAGCGCGATCGGCACCCGCTGCTGCGCCTGCTGATGCGGCCCAATCCGCGTCAGGACGGCGCCAGCTTCTTCGAGACGCTCTATGCGCAGATGCTGCTGGCCGGCAACGCCTATGTCGAAGGGGTCGCGCTTGATGACGAGGTGCGCGAGCTTTACGCGTTGCGGCCCGACCGCATGAGGGTGGTGCCGGGCAGCGAGGGCTGGCCGGATGCCTATGAATATGCGGTGGCGGGACGCAACGTGCGCTTCGAGCAGACGCAAGCGCGCATGCCGCCGATTCTGCATCTGACGTTTTTTCATCCGCTCGACGATCATTATGGCTGCGCGCCGATCGAGGCCGCGGCGGTCGCGGTCGATACCCACAACGCCGCGGCGAAGTGGAACAAGGCGCTGCTCGACAATGCGGCGCGGCCCTCCGGCGCGCTGGTTTATTCCGGGCCGGACGGCGCGGTGCTGTCCGACCAGCAATTCGATCGCCTCAAGCGCGAACTCACCGACACCTATCAGGGCGCGGTCAATGCCGGGCGTCCGTTGTTGCTCGAAGGCGGGCTCGACTGGAAGGCGATGTCGCTGACGCCCAAGGACATGGATTTCCTCGAGGCCAAGCACGCCGCCGCGCGCGAGATCGCGCTCGCCTTCGGCGTGCCGCCGATGCTGCTCGGCATTCCGGGCGACAACACCTACGCCAATTTCCAGGAAGCCAATCGCGCGCTGTGGCGGCAGACCATCCTGCCGCTGGCCGCACGGGTCGGCGCCGCGCTGGCGCAGTGGCTCGCGCCGCAATTCGGCGAGGAGTTGCGGCTGGTCATCGATACCGACAAGATCGATGCGCTGGCGGCCGATCGCGCCGCGCTGTGGGAGCGGATTGCCGCCGCGCCGTTCCTGACACTGAACGAGAAGCGTGAGGCGACCGGCTATGCGCCGATCGCCGGCGGCGATCGGTTGGGATGA
PROTEIN sequence
Length: 392
MLNRFKYLFTAPESKASRTAKVLAFESGGRARWTPRDYAALAREGYLANAIVHRAVRLIAENAASCGFLLYEGALERDRHPLLRLLMRPNPRQDGASFFETLYAQMLLAGNAYVEGVALDDEVRELYALRPDRMRVVPGSEGWPDAYEYAVAGRNVRFEQTQARMPPILHLTFFHPLDDHYGCAPIEAAAVAVDTHNAAAKWNKALLDNAARPSGALVYSGPDGAVLSDQQFDRLKRELTDTYQGAVNAGRPLLLEGGLDWKAMSLTPKDMDFLEAKHAAAREIALAFGVPPMLLGIPGDNTYANFQEANRALWRQTILPLAARVGAALAQWLAPQFGEELRLVIDTDKIDALAADRAALWERIAAAPFLTLNEKREATGYAPIAGGDRLG*