ggKbase home page

SCN18_30_10_14_R3_B_scaffold_6750_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1827..2906

Top 3 Functional Annotations

Value Algorithm Source
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 349.0
  • Bit_score: 426
  • Evalue 2.80e-116
tRNA(Ile)-lysidine synthetase n=1 Tax=Afipia birgiae RepID=UPI0002F87B81 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 342.0
  • Bit_score: 430
  • Evalue 1.40e-117
tRNA(Ile)-lysidine synthase similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 352.0
  • Bit_score: 414
  • Evalue 2.90e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAGCGGGCCCGAGGATAAAAAGACCAGACGCCGGACCGCGCGCACTGCCGAGGCGGTGTCGGCGCAGGAAGCGAAACAGCTTTTCGCCGCGTGGAAATCCGCGCCGGCGCTGCTGCTGGCGGTGTCGGGCGGGCCGGATTCGACCGCCTTGCTCTGGCTCGCGGCGCGCTGGCGCCGCACCCTGAAAGCCGGCCCGCAGATTATCGCCGCCACCGTCGATCACCGCCTGCGCGCCGAATCGGCGCGCGAGGCACGCGAGGTGAGGCGGCTCGCCGCCACGCTCGGCATCGCGCATCGCACGCTGGTCTGGCGCGGCGACAAGCCCGCGAGCGGAATTCCGGCGGCGGCGCGCACCGCGCGCTATGCGCTGCTCGCCAAGGCGGCGCGCCGGGCAGGGGCGAGCGCGGTCGTCACCGCCCATACGCTCGACGATCAGGCCGAGACCGTGCTGATGCGGCTGTCGCGCGGCTCCGGCATTGGCGGGCTCGGCGGCATGGCGCGGGCCTCGCAGCGCGAGGGCATGGCGCTGCTGCGGCCGTTTCTCGAGATTCCCAAGGATCGGCTGGTTGCGACCTTGCGCCGCGCGAAGATCGACTTCGCCAGCGATCCGACCAATCACGACATCGCCTATACACGGCCGCGGCTGCGCGAACTGATGCCGGCGCTGGCCGCGGAAGGCGCCGACGCGCGCAATCTGGCGCGGCTCGCGGCGCGGCTGGCGCGCGCCAACGCCGCGCTCGAACTGATGGCCGATGGCGCGGAGCGCTATCTGCGCCGTCTCGCAGCGGAGGAAACCGCCGGCGCCGTCATCGGTTTCGATCTGGCGGCGTTCGGCCGTCTGTCGGAGGAATTGCAGGTGCGCCTGCTCTGGCGCGCCATCAACCGGATCGGTCACGAGGGGCCGGCCGAACTCGGCAAGGTGGAGACGCTGTTGCGGGCGCTCGACGCGGCCCGAAAGGTCCGTCCGGCGCGGTTTCGGCAGAGTCTGGCCGGCGCGGTGGTCGCGATTGAGCGTGATCGGCTGACCATTCGCCCGGCGCCGCCGCGCCGCCATGGCAAAACCGGCTCGCGCGCGTAA
PROTEIN sequence
Length: 360
MSGPEDKKTRRRTARTAEAVSAQEAKQLFAAWKSAPALLLAVSGGPDSTALLWLAARWRRTLKAGPQIIAATVDHRLRAESAREAREVRRLAATLGIAHRTLVWRGDKPASGIPAAARTARYALLAKAARRAGASAVVTAHTLDDQAETVLMRLSRGSGIGGLGGMARASQREGMALLRPFLEIPKDRLVATLRRAKIDFASDPTNHDIAYTRPRLRELMPALAAEGADARNLARLAARLARANAALELMADGAERYLRRLAAEETAGAVIGFDLAAFGRLSEELQVRLLWRAINRIGHEGPAELGKVETLLRALDAARKVRPARFRQSLAGAVVAIERDRLTIRPAPPRRHGKTGSRA*