ggKbase home page

SCN18_30_10_14_R3_B_scaffold_326_25

Organism: SCN18_30_10_14_R3_B_SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34_56_13

near complete RP 45 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38
Location: comp(27990..30551)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3KEV5_PSEPF similarity UNIREF
DB: UNIREF100
  • Identity: 24.6
  • Coverage: 699.0
  • Bit_score: 168
  • Evalue 2.30e-38
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 24.6
  • Coverage: 699.0
  • Bit_score: 168
  • Evalue 6.50e-39
Putative transcriptional regulator {ECO:0000313|EMBL:ABA73701.1}; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf0-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 24.6
  • Coverage: 699.0
  • Bit_score: 168
  • Evalue 3.20e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2562
ATGGCTACTCATTACGCCACGTTTGTAGCCATCACCATTCCTCGTCCCTTCAAGCCCAAGGCGACGAAGAAATCGGACCCGCTAACCGTTGCCATCGAGAAGCTATTCGCGGCTAACGCGCAACTGCTTGCCAGTCGAAACGATAAGGTTTGGTCCACTACGCTGCAGTTCTCCAGCGTCGGCGAGGCCCTGCGAATCGTCGGCGAGTTTGCCCGTCGGTTAGTCGCCCTCAATCAGAACGTTCCTTTCCACATCGGCGTCTCTACGGGCGAAATCGCGCACGAGCAGCCCAACCTCACCGATTTGCCCTATCAACGCGCGCAATGGCTGGCCGACGTTGCTCCCCAAAACTGCATCCTCATTTCCAGCATCACCAACGCCATTGCGGAGGACCTGGAGCTCTTTCCCTACTGGGCGATCTGTCTCGGTGAACTTCATAACGTTCAAATGGGCCGAACCGAAACCGTCTGGGCCCTCCGCCACTTTGAACTTCCCGAACCCGAACCCTTCCGAGACGACCTCACCGCCCGTCACAACATCCCGCTGTCCGACACGCTTGTCATTGGCCGCAGCGACGAGATCGAGCAGATCCAAGTCCAACTCCAAAGAGACCGTTGGGTCACCCTTCTCGGCCCGAGCGGCGTTGGCAAATCGGTTTTGGCTCATCGAGTAGCGCGTGAACTCTGCATTGAATTAGACGAGGAAGAAGGCACTCCCCTCATGCGCGATGGCGTAAGATTCGTTGACCTTGCCGGAGCAACCACGCGTGATGAAGTGGTTGGTCGCATGTTCGCGGCCATTGGGATGCAAGTCGAACACCTTGGGGCAATTTCCGATGCGATGATTCGGAAGTACTTCGGAAATCGCCGCCACTTGATCCTATTTGATGGGTGCGAGCGGGCCGTCCCAGACGTTAGCCAAATCATCAAGTCGCTTCTATCGACGAGTGGCGTCTACGTACTCGCTACATCCACAACGCCACTTGAGCCATCTAACGATCACTCCTTCAGAATTCAACCACTAGGCATCCCGCCAACATCGAAGTCTCTGTCCCTTGAGGATCTGGAGACATACGAAGCGACTGCCCTTATGTTGGATCGCATGCGATTGATTCACCACGGGTATCACCCCAACCCGGACGAAATCAAACTGATCGTTGAAATATGCCGATCGCTAGCTGGGCATCCCCTTGCCATTTCACTTGCTGCAAAGAGAACACGTTCCGAGTCGCTCCAAGAAGTTCTTGCTCTTGTCCAGGGAAAGAAGCAAGACGCCCATTTGGAACGGGAAGGACGTCACGATAGCCTTAGCGCCTCGGTAAGGTGGACCATCGATAGCCTTCCCCCAGCCACGTGCAGCGTTCTGGAATGGGCTTCCGTTTTTGAAGACATTTGGATGCCGGATGATCTTGCTGAACTGATTGGCGAGGAGGTCAAGACGATTCGCGCGCCCATTGAGTTTTTAGAGGACTTAGGGCTGATTGTCGAATCAAATCTCCTAGAAGAGCGTGCGGGATACAGGCTCGAATCTCACATTCGAACGGCGATTCGCGATTCGCTGGAGCGCGAAAAGGACTGGCGTGACATACGTGAGCAGCACTTCATGTATTTATATGCCAAGTTTGCCGCTCTCATGCCGCTCACCGGCGCCAATCAAGCGGAAAATCTTGCGAAGCTTGACGCCATGCGAGCCGATTTCGAATCGGCTTTGCGATTTCTGATTGAAGTCAGAAAATCTCCGCGAGACTTCCTGGAAGTTTCTAGGCAATGCTGGTCTTATTGGTATCGACGAAATCGATTAAGATCTGGCATATCTCTGGCAGATGAGTGTCTGGCAATCTGTGGCCCAGAAGACAAGGAAGAACTCGTCTCCATGGACATTCTTGCTTCAATTTTTCTTACGAAAGCTGGGGACACCGAACAAGCCATTTCACGCCTCAAGCGCGCCTATGAGACGGTCAAAGATATGAACGATCTTGTGCTTCGGGCTCGTGTGTTGGTGAACTTATCGTCAGCATACTGGGCTAATGCAAATCCCGAACTTTCATTGGAATGCGGTCAAGAGGCGCTGGCGCTTGGCCGGGAAGCAAATCACGTTCCCATGATTCATTCTGCTCTGAGCAATGTCGCAGGAGCAGCTCTGAATCTTGGGCTTCACGAACTCTATGTCGATTGTCTTCAGGAGTATGAGCAGATTGGCGCAAGCACCTCCGATCACCGAACAAAATGGGGAATCGACATCGGCTGGGCAGAAATTCTGTGTGAGACCGGAAAGTATGACGAAGCTCTTGAGAGGATTGAGCTTTCCCTGGCCCATGCCGAACGATCAGGCGATCCAACAATTGTGGGCAGATCCTACCTCTGGCGGTCTCAAATCATGCTTGAGCTAGGCAGATTCGAAGAGTCGGCCGAGAACCTGGGAAGATGCCTTTACCGTCTGTCCTCGGGAGATCAGGCCCCCTTCAAAGTCAACGAGATCAGAATCGCCCGGATCGAAGGCAGACTTAGAAATGCCATTGGCGATGCGAACCTAAACTTCTACAAATTAATCGGGTCTGGCTAA
PROTEIN sequence
Length: 854
MATHYATFVAITIPRPFKPKATKKSDPLTVAIEKLFAANAQLLASRNDKVWSTTLQFSSVGEALRIVGEFARRLVALNQNVPFHIGVSTGEIAHEQPNLTDLPYQRAQWLADVAPQNCILISSITNAIAEDLELFPYWAICLGELHNVQMGRTETVWALRHFELPEPEPFRDDLTARHNIPLSDTLVIGRSDEIEQIQVQLQRDRWVTLLGPSGVGKSVLAHRVARELCIELDEEEGTPLMRDGVRFVDLAGATTRDEVVGRMFAAIGMQVEHLGAISDAMIRKYFGNRRHLILFDGCERAVPDVSQIIKSLLSTSGVYVLATSTTPLEPSNDHSFRIQPLGIPPTSKSLSLEDLETYEATALMLDRMRLIHHGYHPNPDEIKLIVEICRSLAGHPLAISLAAKRTRSESLQEVLALVQGKKQDAHLEREGRHDSLSASVRWTIDSLPPATCSVLEWASVFEDIWMPDDLAELIGEEVKTIRAPIEFLEDLGLIVESNLLEERAGYRLESHIRTAIRDSLEREKDWRDIREQHFMYLYAKFAALMPLTGANQAENLAKLDAMRADFESALRFLIEVRKSPRDFLEVSRQCWSYWYRRNRLRSGISLADECLAICGPEDKEELVSMDILASIFLTKAGDTEQAISRLKRAYETVKDMNDLVLRARVLVNLSSAYWANANPELSLECGQEALALGREANHVPMIHSALSNVAGAALNLGLHELYVDCLQEYEQIGASTSDHRTKWGIDIGWAEILCETGKYDEALERIELSLAHAERSGDPTIVGRSYLWRSQIMLELGRFEESAENLGRCLYRLSSGDQAPFKVNEIRIARIEGRLRNAIGDANLNFYKLIGSG*