ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1084_26

Organism: SCN18_30_10_14_R3_B_SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34_56_13

near complete RP 45 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38
Location: comp(25470..26051)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D4486E similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 125.0
  • Bit_score: 60
  • Evalue 2.00e-06
Marine sediment metagenome DNA, contig: S01H1_S00874 {ECO:0000313|EMBL:GAF92818.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 85.0
  • Bit_score: 55
  • Evalue 5.30e-05

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGCCAGTACTCACTCTCGCCATAATCATGAGTCTGCAGTCACCTCCTGACTTCACCCCTGCCGAACTCCATGTCAAAGAGCAGTTGCAAAGCGTGCGAGGCGCCATGGTTTGGGTGTCTCCTGACCCGCGAGAATCGAAGGATAAGTGGGTGCTCAGTGTCGATATCGAAAACAAGGGCCGAAACTTTGACTGCACGATGATCAAACCACTCAATCGCCTTTATGCCCTTCGAATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGTGGCCACGGGAACCGGACTTGATGACGCAGATCTGATTCATATCGGGAAGTGCAAGTCGCTCAACAAACTGGATATTGGCGGAGAACACGTTTCGGGCGCCGGACTAAAGCAGATATCCGGTGTGCGCACACTTCGCCGACTCTTTCTATACAACACCAAAATTAAGGACGCAGATTTGGCTCCGCTAGAAAAGATGACCTTTTTGGATCAGCTGGTTCTTCCCAAGACCGTCACAGAGGGCGCACTTGAGGCTCTGGCGCATAAGTTAAAACACACGCAGGTTAGCCAATAG
PROTEIN sequence
Length: 194
MPVLTLAIIMSLQSPPDFTPAELHVKEQLQSVRGAMVWVSPDPRESKDKWVLSVDIENKGRNFDCTMIKPLNRLYALRIXXXXXXXXXXXXXXXXFVATGTGLDDADLIHIGKCKSLNKLDIGGEHVSGAGLKQISGVRTLRRLFLYNTKIKDADLAPLEKMTFLDQLVLPKTVTEGALEALAHKLKHTQVSQ*