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SCN18_30_10_14_R3_B_scaffold_864_25

Organism: SCN18_30_10_14_R3_B_SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34_56_13

near complete RP 45 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38
Location: 28179..28739

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=mine drainage metagenome RepID=E6PFB2_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 176.0
  • Bit_score: 118
  • Evalue 4.60e-24
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 241
  • Evalue 1.00e-61
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AIE86201.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 241
  • Evalue 5.00e-61

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Taxonomy

SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34 → Bacteria

Sequences

DNA sequence
Length: 561
ATGAAAACCGGAAAGATCCTCTGCTGGGAGGGACATCTCATCCAGCGAGCGTCGCGAGGCGAGTCGGTCGCCTTCGAACTCATATCGGATCTCTACCGACCCATTCTTCTGAACCTCGCAATGCGCATTTTGCGCAACGCAGATGATGCAAATGATGCAGTACAGGAAAGCTTGGTTAAGGCATATCGAGCGATTAGGGACTTTGACCCGAATCGTCCGATTAAGCCGTGGCTCTGCCGGATCTGCACTAACGTTTGTATCGATATGGTGCGAAGCCGAAAGTACGAGGGCGATTCGATCGATCAGCATGAATATATGCTGTGCGACGAGTCGAGCAGCTTAGAAGACCAAGCGGGCGCGAACATGGCGCGCACTCAGGTGATCGAAGCGATATCCCGACTGCCCGAGAAGTATAGAAAGATCATCTTTCTGCGTCACTTCCGGCATATGGATATCAACGAGATTGCCATTGAGCTTCAAAAACCCGAAGGCACGATCAAAAGTTGGCTCTTTCGAGCCAGAGGCTTACTCAAGCAAGATTTGACGATGGCAACAGGGTAG
PROTEIN sequence
Length: 187
MKTGKILCWEGHLIQRASRGESVAFELISDLYRPILLNLAMRILRNADDANDAVQESLVKAYRAIRDFDPNRPIKPWLCRICTNVCIDMVRSRKYEGDSIDQHEYMLCDESSSLEDQAGANMARTQVIEAISRLPEKYRKIIFLRHFRHMDINEIAIELQKPEGTIKSWLFRARGLLKQDLTMATG*