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SCN18_30_10_14_R3_B_scaffold_1848_7

Organism: SCN18_30_10_14_R3_B_SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34_56_13

near complete RP 45 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38
Location: comp(4689..5234)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZA4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 176.0
  • Bit_score: 131
  • Evalue 6.60e-28
RNA polymerase sigma factor sigW similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 179.0
  • Bit_score: 316
  • Evalue 3.10e-84
RNA polymerase sigma factor sigW {ECO:0000313|EMBL:AIE87989.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 179.0
  • Bit_score: 316
  • Evalue 1.60e-83

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Taxonomy

SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCCTAATGACGCAATGCGAGACTCACTGGCCGAAAAGCGCTGGCTCACCGCCCTTTCACAGGGCGATCCCCAAGCGCTTGGCGGACTGTATGAAATGTACGGAGAAAGAATTTTCCGATACACGTTTCGCATGCTCGGCAACCGAACGGATGCGGAAGACGCGACTGCAGAGACGTTCCTGCGGGTACTCCGCCGCTCAGCGGAGTTGCGTGCCGACGGCGCCTTTAGGACCTGGTTATTCCGGATTGCCCGGAACCTATGCATCGACAAAATGCGGCAGCACAAACTCATGGAGCTGCCCTCAGACGCGCACTACTCAGGTTCGGAGGAAAGAGCTGCTCTGCGGGTAACCGTGCAGCAAGCCCTCGCGGATCTGCCGATGGAATATAGAGAGCCGTTGGTCCTCTGTGATTTAGAGGATATGGCGGCCCGTGAAGCGGCGGAGATTTTGAAAATAAGCGTTCCTGCGCTTAAATCAAGGCTATACAGAGGACGTAGAGCCCTCCGCGACAAGCTGGGTGGAACCCTAGAGAGGACGTCGTGA
PROTEIN sequence
Length: 182
MPNDAMRDSLAEKRWLTALSQGDPQALGGLYEMYGERIFRYTFRMLGNRTDAEDATAETFLRVLRRSAELRADGAFRTWLFRIARNLCIDKMRQHKLMELPSDAHYSGSEERAALRVTVQQALADLPMEYREPLVLCDLEDMAAREAAEILKISVPALKSRLYRGRRALRDKLGGTLERTS*