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SCN18_26_2_15_R1_B_scaffold_635_21

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25011..25997)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FCY1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 317.0
  • Bit_score: 307
  • Evalue 1.60e-80
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EYR81070.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 317.0
  • Bit_score: 309
  • Evalue 4.50e-81
Transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 319.0
  • Bit_score: 296
  • Evalue 6.10e-78

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGAACGTGTCGCTTCGCCATCTGTCCTATCTGTGCGCCGTCGCTGAACTGGGAAGCGTTCAGGCGGCCGCGAAGCACCACAGGATTTCGACGTCCTCGATCCTCGCGGCGATTGCGCATGCCGAGAGCGAGTTCGGCGCGATGATCTTCTTCCGGATGGCGTCCAAGGGCACACGGGTGACGCCTCACGGAGAACGGTTCATCACCGCCGCGCGCAGCCTGCTGCACGCCCAGGACGAGTTCGTCCAGCGTGTCGGCCCGCTGTCCTACGCGACGCCGGCGCGTGTCCGGATCGGCTGCTTCCGGCCGTTCAGCTCGCTCTTCATGAGCGCGCTCGTCCGAAAGTTCGTCGACGCGACCGGGCCGATCGAGATCGAGCTCAAGGAAGGTGACGTCACCGAACTCTACGACTGGCTCAGCAACGGCACGGTGGATGTCGTCATGGCCTACGACATCGGCCCTCATTACCCTGGCAGTGCGACGCCCCTCTGCAAGGTGCCCCGGCATGTCGCGATCCATGCGGACGACCCGCTCGCCGGAAAAAAGGAAATCAGCCTCAAGGAAATCGCGCAGCGCGACCTCGTTCTGCTGGATCTGCCGCACACCGAGGAATTTCTGATGGCCGCGTTCGACATCCTCGCCGAGCGTCCGAAGGTCTGTTTCCGGTCCAGATCCTATGAGGCGGTCCGCAGCGCCGTCGTTCTGAAATTCGGCCCCACCCTTCTCAACTTCCGGCCTTCGCCCCTGGTCGCGGCCGACCCTCCGGAAATCGTCCGCCGCCCGCTGCTGGAGAAGATACCCGCGCCGCAGGTGGTCGTGGTCGACGTTTATGGGCACATAAAGCCGGCATTCGTCCGGAAGTTCATAAAAGTCGCCCATGACTTCTTCAGCGACTGGGGGCAGGAGAGCTTCGCGGTGACGACATCGGAAGGCAGCAAAGGCCTGCTTATTCCGCTGCCCAGCCAGCATGGCCGCACGTCACGCTGA
PROTEIN sequence
Length: 329
MNVSLRHLSYLCAVAELGSVQAAAKHHRISTSSILAAIAHAESEFGAMIFFRMASKGTRVTPHGERFITAARSLLHAQDEFVQRVGPLSYATPARVRIGCFRPFSSLFMSALVRKFVDATGPIEIELKEGDVTELYDWLSNGTVDVVMAYDIGPHYPGSATPLCKVPRHVAIHADDPLAGKKEISLKEIAQRDLVLLDLPHTEEFLMAAFDILAERPKVCFRSRSYEAVRSAVVLKFGPTLLNFRPSPLVAADPPEIVRRPLLEKIPAPQVVVVDVYGHIKPAFVRKFIKVAHDFFSDWGQESFAVTTSEGSKGLLIPLPSQHGRTSR*