ggKbase home page

SCN18_26_2_15_R1_B_scaffold_1094_27

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25074..25580)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035D282E similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 158.0
  • Bit_score: 261
  • Evalue 3.00e-67
HxlR family transcriptional regulator {ECO:0000313|EMBL:EIE50280.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 157.0
  • Bit_score: 218
  • Evalue 7.00e-54
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 157.0
  • Bit_score: 217
  • Evalue 2.40e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAAAATCAAACTCTGTTATGCTGACCGCATGACTGAATCCGCCTCCAAGATCGTTTCCTCCCACCAAGTCCCTGTGCCACTCCCAGAATGCGCGCTCGCGCGAGCCATCCGTGCCATCGGCGACGGCTGGACGCTGCTGATCCTTCGGGAAGCCTTGTGTGGGGTGGAGCGGTTCGACGCGATGCACGACGATCTCGGCATTCCGCGCTCGGTGCTCGCGGAGCGGCTGTCAAAGCTGGTCGCGGAAGGCATCCTCGAACAGCGACCCTATCGGGAGCCGGGCCGCCGGCAGCGCAATGGCTATGTGCTGACGGAGAAAGGCCGCGCGCTCACGCCGGCACTGGTCGCTTTGCGCGAGTGGTCGGAAGCCCATCTGCCCGGCGGTCCTTCGCGATTGCGCTTGCAAACTGCGGATGGCCAAGAGGTCGTCACCCGCCTCATGCGCGCCGATGGCGTGGTGCTGGACAACTCTTCCGAAATCGTGGCGGTAGCGAAGCCGGAATAG
PROTEIN sequence
Length: 169
MKIKLCYADRMTESASKIVSSHQVPVPLPECALARAIRAIGDGWTLLILREALCGVERFDAMHDDLGIPRSVLAERLSKLVAEGILEQRPYREPGRRQRNGYVLTEKGRALTPALVALREWSEAHLPGGPSRLRLQTADGQEVVTRLMRADGVVLDNSSEIVAVAKPE*