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SCN18_26_2_15_R1_B_scaffold_3222_8

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 8212..8913

Top 3 Functional Annotations

Value Algorithm Source
RND family transporter n=1 Tax=Brucella neotomae 5K33 RepID=C9V536_BRUNE similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 229.0
  • Bit_score: 313
  • Evalue 1.60e-82
Putative efflux protein {ECO:0000313|EMBL:GAK69984.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 225.0
  • Bit_score: 319
  • Evalue 3.10e-84
putative multidrug efflux transporter protein, AcrB/AcrD/AcrF family protein similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 229.0
  • Bit_score: 312
  • Evalue 5.80e-83

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGACCTCGGTGACGCTCTCCTTCAACCTGCCGGACGGCGTCTCCCTCGGCACGGCGACCGCCGAGCTCCAGGCGCTGCGCACCCGCATCGGCATGCCCGCCGGCGTCGCCACGCAGCTTGCCGGCGCCGCCAAGATCTTCGAGCAGTCGACCGGCAACACCGGCATCCTGATCGGCGCGGCGATCCTGACGATCTACATCGTGCTGGGCGTGCTCTACGAAAGCTTCGCCCACCCGCTGACGATCCTGTCCGGCCTGCCCTCGGCGGCCTTCGGGGCGCTGCTGGCGCTGAAGCTCGCCGGCTTCGACCTGTCGATCATCGCGCTGATCGGCCTCCTGATGCTGATCGGCATCGTCAAGAAGAACGCCATCATGATGGTGGACGTGGCGCTGGAGAAGAAACGCCACGAGGGCATGTCAGCCGCCGACGCGGTCCATCATGCGGCGGTGCTGCGCTTCCGCCCGATCATGATGACGACGTTCTGCGCGCTGCTCGCCGCCGTTCCGGTCGCGGTGGGGACGGGCGCCGGCTCGGAGCTGCGCCAGCCGCTCGGCGTCGCCGTGGTCGGCGGCCTGATCGTCAGCCAGCTGCTGACGCTCTTCATCACGCCGGTGATCTTCGTCGAGATCGACCGCATGTCGGACCGGATCCGCGGCTGGACGGCGGGCCGCGCCGGAACGCAGGCCCCGCAGGAGGCCTGA
PROTEIN sequence
Length: 234
MTSVTLSFNLPDGVSLGTATAELQALRTRIGMPAGVATQLAGAAKIFEQSTGNTGILIGAAILTIYIVLGVLYESFAHPLTILSGLPSAAFGALLALKLAGFDLSIIALIGLLMLIGIVKKNAIMMVDVALEKKRHEGMSAADAVHHAAVLRFRPIMMTTFCALLAAVPVAVGTGAGSELRQPLGVAVVGGLIVSQLLTLFITPVIFVEIDRMSDRIRGWTAGRAGTQAPQEA*