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SCN18_26_2_15_R1_B_scaffold_438_20

Organism: SCN18_26_2_15_R1_B_Proprionibacteraceae_70_19

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(27396..28988)

Top 3 Functional Annotations

Value Algorithm Source
Putative lactose-sensitive fimbrial protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2QC14_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 543.0
  • Bit_score: 374
  • Evalue 1.00e-100
Putative lactose-sensitive fimbrial protein {ECO:0000313|EMBL:ERK53689.1}; TaxID=553198 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidifaciens F0233.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 543.0
  • Bit_score: 374
  • Evalue 1.40e-100
fimA; fimbrial structural subunit similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 540.0
  • Bit_score: 339
  • Evalue 1.70e-90

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Taxonomy

SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGAGGGACTCCCACAACCCCCATCGACGGCGACGAGTGGTCGCAGCGCTCGGGGCCTTGACGCTGAGCCTGATCGGCGTGACCTGGTCGGCGGCGCCGGCGTCCGCGGACGACTACGGCAACGTCGACAACACCAAGGCCGGCTCGATCATCATCCACAAGCACGTGCACCAGACCTCGACGTCCGTGACCGCCTCCCCGGACGGCTCGGCGAGCATCCCGTCCGCAGGGATCTCGGGCGTCGAGTTCACCGCCTACCGGGTCACCGGCATCGACCTGACCACCAAGGCCGGCTGGGACGCGGTCGCCACCCTGACACCCACCTGTTCGCCACCGGCGGGGACGACCGTTGCCGGTGCCGAGAGCACGGGGGCCGGCGGGCTGGCGACGATCTCGCTGCCGGCCGGCAGCGCCGTTGGCGCCTACATCGTCTGCGAGACGAGATCCCCCTCGAACGTCGTCGACAAGGCGCAACCCTTCGTGGTCACGATCCCGTTCTCCTACCAGCGCACCGTGAGCGGCAGCCCGGTGGAGGGCTGGCTGTACAACGTGAACGTCTACCCGAAGAACGGTGTGGCGGACGTGAGCAAGACGGTGGCCGAGCAGACGAACCTCGGCCTGGGTGCGACGGCGTCCTTCCCGGTCACCACCGACATCCCGAAGATCGCCAGCAACGCCAACTTCCTGTACTACTGGGTGCAGGACCCGATGGACAGCAGGCTGACCGGCGCCACCGTGTCGAGCGTGCAGCTCGCGGGCGGGACGAACGTGCCGAACGCCGGCAATGTCAACTACACGGTGACCACCAGCGCCACCAACGTCGTCTCGGTGCAGTTCACCACAGCCGGACTGGCCTGGCTGAAGACGCATGCCCCTGACCGGCTGGTCACCACCTTCACCGGCACCGTGAACGGCCTCGGCACCGACGGGGTGATCAACAACACGGCCTACTTCGGCACCAAGACGGCCGCCCAGGACGACCCGCCGGACAGCCCGCAGGCGCCGCCATCGGATCCGACCACCTCCCCGGACACGAATCCTTCTCCCGTGCTCGTCACCCAGCGGTGGGGCGATCTCAAGCTGGCCAAGGTTGACCGGGGCAGCAGCTCCGCGGTCGGGCTGGCCGGCGCCAAGTTCCTGGTCTACGCGGCCGACCCGGCCTACGTCGCCAGCGGCGACTGCACGTCGGTCGTGACCACCGGCTCACCGGTCGTGGTCAACGGTGTCGGGACGTCTGCCAACCCGTTCGTGAGCGGCGACAACGGCGCCCTGACCATCGCCGGCCTGTTCGTCTCCGACAGCGTGCACGCCACGATCGATGCGAGCCAGCGGTGCTATGTGGTGGAGGAGATCGAGGCCCCGGCCGGTTTCGCGCTGCCCGCCGGCGACAGCGCCAAGACGGCGGTCACGGTGAAGGCCGGCGTCTCCGCGGCAGTCGAGAAGTCGATCCCCAACACCAGGCTGTCCGGGGTCCGGTTGCCGATGACCGGCAGTGACGGGCTCGTGGTGTTCTCGGTCGTCGGGGCCGGGCTCGTAGCGCTGGGCCTGGCGGTCGCGGTGCTCTCGCGCCGACGCCGCAGCCAGACCGCCTGA
PROTEIN sequence
Length: 531
MRDSHNPHRRRRVVAALGALTLSLIGVTWSAAPASADDYGNVDNTKAGSIIIHKHVHQTSTSVTASPDGSASIPSAGISGVEFTAYRVTGIDLTTKAGWDAVATLTPTCSPPAGTTVAGAESTGAGGLATISLPAGSAVGAYIVCETRSPSNVVDKAQPFVVTIPFSYQRTVSGSPVEGWLYNVNVYPKNGVADVSKTVAEQTNLGLGATASFPVTTDIPKIASNANFLYYWVQDPMDSRLTGATVSSVQLAGGTNVPNAGNVNYTVTTSATNVVSVQFTTAGLAWLKTHAPDRLVTTFTGTVNGLGTDGVINNTAYFGTKTAAQDDPPDSPQAPPSDPTTSPDTNPSPVLVTQRWGDLKLAKVDRGSSSAVGLAGAKFLVYAADPAYVASGDCTSVVTTGSPVVVNGVGTSANPFVSGDNGALTIAGLFVSDSVHATIDASQRCYVVEEIEAPAGFALPAGDSAKTAVTVKAGVSAAVEKSIPNTRLSGVRLPMTGSDGLVVFSVVGAGLVALGLAVAVLSRRRRSQTA*