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SCN18_30_10_14_R2_B_scaffold_607_17

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(12555..12899)

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcripitonal regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D7DC8C similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 109.0
  • Bit_score: 141
  • Evalue 3.10e-31
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 109.0
  • Bit_score: 131
  • Evalue 1.50e-28
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ADJ23561.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 109.0
  • Bit_score: 131
  • Evalue 7.60e-28

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGCCAATCCCAGTTTCATGAACGGCGTGCCGGAGCTTTTGATCCTGCGCACTCTCGAAAGCGGCGAGATGTATGGCTATGAGCTGGTGCAGGCCATCCGCGCGCGCACCAATCAGGCGATCAAGCTGGGCGAGGGCGTGGTCTATCCGGCGCTGCATGCGCTGGAGCGCGAGGGCATGCTCAAATCCCGCCGCAAGCTTGTGAACGGGCGCACGCGGGTCTATTACGCCCTGACGCGCAAAGGCGAAAAGCATCTGGCCGGCCTGGTCCGGCACTGGCAGCAGATCACGGATGCCATCGGTCTTGCGATAGGAGGAACAGCCCATGCCGCAACCATGCTTTGA
PROTEIN sequence
Length: 115
MANPSFMNGVPELLILRTLESGEMYGYELVQAIRARTNQAIKLGEGVVYPALHALEREGMLKSRRKLVNGRTRVYYALTRKGEKHLAGLVRHWQQITDAIGLAIGGTAHAATML*