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SCN18_30_10_14_R2_B_scaffold_1352_5

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2692..3165)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NW45_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 157.0
  • Bit_score: 230
  • Evalue 9.10e-58
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 157.0
  • Bit_score: 230
  • Evalue 1.30e-57
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 157.0
  • Bit_score: 222
  • Evalue 7.00e-56

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGAAAAAATTCCGATGACGGCTGCGGGCTTCAAGAGCCTGGAAGATGAGCTGAACCATCTCAAGAATGTGGACCGCCACGAAATCATCAAGGCGATCGCGGAAGCGCGCGCCCATGGCGACCTGTCGGAAAACGCCGAATATCATGCCGCCAAGGAACGCCAGAGCTTCATCGAAGGCCGGGTGATGGAACTGGAAGACCAGATGGGCCGCGCCGAAGTGATCGACATTTCCAAACTGTCGGGCAACAGCATCAAGTTCGGCGCCACCGTCACTCTGGTCGACGAAGACACCGACGAGAAGCGCAAATACCAGATCGTGGGCGACGTGGAATCCGATGCCCGCAAAGGCCGCATCTCGCTCTCCTCGCCCATTGCGCGCGCGCTGATCGGCAAGAGCAAGGGCGATTCCGTGGAAGTCGCCGCGCCCGGCGGCGCACGGTCCTACGAAATCCTGAAAGTGGAATTTGTCTAA
PROTEIN sequence
Length: 158
MEKIPMTAAGFKSLEDELNHLKNVDRHEIIKAIAEARAHGDLSENAEYHAAKERQSFIEGRVMELEDQMGRAEVIDISKLSGNSIKFGATVTLVDEDTDEKRKYQIVGDVESDARKGRISLSSPIARALIGKSKGDSVEVAAPGGARSYEILKVEFV*