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SCN18_30_10_14_R2_B_scaffold_2256_27

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(19767..20585)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICH1_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 303.0
  • Bit_score: 185
  • Evalue 5.80e-44
Membrane-fusion protein {ECO:0000313|EMBL:KIH84115.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 213.0
  • Bit_score: 272
  • Evalue 3.90e-70
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 305.0
  • Bit_score: 185
  • Evalue 1.60e-44

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAAAAGGATTTTCCTGCTGCTATGCGTTGTCCTGGCGGCTTGCGGCGAAAAGAAAAGCGATGCCTGGCTGGGTTATGGCGAAGGCGACAATGCCTTCATCTCGGCGCCGCAACCGGGTTGGGTGACGGCGATGAAGGTCGAGCGGGGCCAGATGGTCCATCGCGGCGATCTTCTCTTTGTGCTGGACGACACCCGCGAACAGGCCGGCCGGGATCAGGCCGCTGCATCCTTGAGCGCAGCCCGCGCCGGCCTGTCCCAAGAGCAATCCAATCTGGCCTATGCTCGAACCGCGCTCGACCGCCAGAACGGATTGGCGCGCGACAATGCGGGGACCCCGGCACTGCGCGATCAGGCGCTCAACAATTACCGGCAATCCTCGGCGCGGATCGCTCAGCTCAAGGCCCAGATCGCGCAGATGGAAGCCTCGCTGAACAATGCCGCCTATGGTCTTTCGCAGCGCGCGGTAGTGGCCCAGACCGACGGTCCGGTGCAGGACATCTATTTCCGCGAGGGCGAATATGTCCCCGCCTCCACGCCGGTGCTGTCCATCCTGCCGCCCGCCAATATTTTCGTGCGCTTCTTCGTGCCCGAAGGCCAGCTTTCGCGCGTGCATCTGGGTCAGGTGGTGACGATCGGCTGCGATGGCTGCAAGCTGCTGACAGCCAAGATCAGCTTCATCGCCGCGCGGGAAGAATTCACCCCGCCGGTGATCTTCAGCGTGGATAATCGCGAGAAGCTGGTCTTCAAGCTGGAGGCGCGCGCGCCCGGCGGCCTTCTCCTCAATCCCGGCCAGCCGGTGGAAGTGCGTCCGCAATGA
PROTEIN sequence
Length: 273
MKRIFLLLCVVLAACGEKKSDAWLGYGEGDNAFISAPQPGWVTAMKVERGQMVHRGDLLFVLDDTREQAGRDQAAASLSAARAGLSQEQSNLAYARTALDRQNGLARDNAGTPALRDQALNNYRQSSARIAQLKAQIAQMEASLNNAAYGLSQRAVVAQTDGPVQDIYFREGEYVPASTPVLSILPPANIFVRFFVPEGQLSRVHLGQVVTIGCDGCKLLTAKISFIAAREEFTPPVIFSVDNREKLVFKLEARAPGGLLLNPGQPVEVRPQ*