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SCN18_30_10_14_R2_B_scaffold_5096_10

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(9659..9967)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 113.0
  • Bit_score: 95
  • Evalue 4.10e-17
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 109.0
  • Bit_score: 90
  • Evalue 1.60e-16
DNA-directed RNA polymerase subunit omega n=1 Tax=Rhodovulum sp. PH10 RepID=J5PKE9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 113.0
  • Bit_score: 95
  • Evalue 3.00e-17

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Taxonomy

SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
CGGGCCCGGCAATTGTCCGGCGGCGCCGAGCCGCTTTTGGAGCGCGATCGCGACAAAAACCCGGTCGTGGCGCTGCGCGAGATCGCGGCCAAGTCGCTGAAGCCGGAAGACGTCAAGGAAGACTATATCCGTTCGCTGCAGAAGCATGCCGAAGTGGACGAGCCGGAAGAGGCGCGTCCGGAGGCCGACGACCGCGAGGATCCCTCGCATCGCCAGGTCACGGAAGAAGAGCTGCTGCGCGCCCTGACCACCGAAGCCCAGCGCAGGGCGGAGCCCCAGCCCGAGCCCGAGGCCGACTACGAAGAGTGA
PROTEIN sequence
Length: 103
RARQLSGGAEPLLERDRDKNPVVALREIAAKSLKPEDVKEDYIRSLQKHAEVDEPEEARPEADDREDPSHRQVTEEELLRALTTEAQRRAEPQPEPEADYEE*