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SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

SCN18_30_10_14_R2_B_unknown_63_12
In projects: SCN18_30_10_14_R2_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy:

Description

SCN18_30_10_14_R2_B_concoct_063

Displaying items 51-64 of 64 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_30_10_14_R2_B_scaffold_1612
Class: Alphaproteobacteria (100%)
11 18146 bp 62.12 12.42 93.56
SCN18_30_10_14_R2_B_scaffold_3878
Order: Caulobacterales (60%)
10 8735 bp 61.83 11.73 94.14
SCN18_30_10_14_R2_B_scaffold_4415
Species: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 (100%)
10 7876 bp 63.42 12.55 90.16
SCN18_30_10_14_R2_B_scaffold_5096
Species: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 (60%)
10 9969 bp 63.11 10.92 96.60
SCN18_30_10_14_R2_B_scaffold_4823
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (77.78%)
9 7346 bp 61.64 9.80 89.29
SCN18_30_10_14_R2_B_scaffold_8566
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
7 7301 bp 52.14 8.51 88.34
SCN18_30_10_14_R2_B_scaffold_10359
Species: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 (100%)
6 4016 bp 64.14 10.72 90.69
SCN18_30_10_14_R2_B_scaffold_17583
Class: Alphaproteobacteria (50%)
6 2647 bp 62.86 12.18 83.98
SCN18_30_10_14_R2_B_scaffold_7108
Species: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 (50%)
4 5417 bp 61.49 10.22 88.50
SCN18_30_10_14_R2_B_scaffold_50295
Class: Alphaproteobacteria (66.67%)
3 1165 bp 65.15 10.56 90.39
SCN18_30_10_14_R2_B_scaffold_21822
Species: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 (50%)
2 2242 bp 59.72 8.16 84.43
SCN18_30_10_14_R2_B_scaffold_41006
Species: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 (50%)
2 1370 bp 60.07 7.34 61.75
SCN18_30_10_14_R2_B_scaffold_25461
Species: CN-SCN_Devosia_27x (50%)
2 1984 bp 61.34 9.75 66.68
SCN18_30_10_14_R2_B_scaffold_52591
Species: SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 (100%)
1 1124 bp 63.70 20.28 99.82
Displaying items 51-64 of 64 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.