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SCN18_25_8_15_R2_B_scaffold_1251_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 2397..3845

Top 3 Functional Annotations

Value Algorithm Source
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KKB82844.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KKB82844.1};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 482.0
  • Bit_score: 845
  • Evalue 2.60e-242
UPI0003CE4EA8 related cluster n=1 Tax=unknown RepID=UPI0003CE4EA8 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 482.0
  • Bit_score: 795
  • Evalue 1.70e-227
gabD1; Succinate-semialdehyde dehydrogenase [NADP+] (SSDH) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 481.0
  • Bit_score: 748
  • Evalue 8.60e-214

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGCATGCCCTGACCGATCCAACCCTGCTGCGCACGCAGAGCCTCATCAATGGCGAGTTCATTGGTGAGGGAAGCGTAGCGGTGACCAATCCTGCGACCGGCGAAATTCTGGCGCATGTGCCGAATTTCGGCGCCGACGAAGCAACGCGCGCGGTAGATGTGGCCGCTTCAGCGTTTCATCCCTGGGCGGCACGGACGGCGAAGGACCGTGGCGCGATTCTGCGCAAATGGTTCGACCTGATCGTTGCCAATCGCCGGGACCTCGCAACGATTCTCACCAGCGAGCAGGGCAAACCGTTTGCAGAAGCGCTGGGCGAGATCGACTATGCCGCTTCCTACGTCGAGTTTTACGCCGAAGAAGCAAAGCGCATTGCCGGAGAAATGCTGCCCTCGCACCGCAGTGATGCGCGCATCATGGTCCTGCGCCAGCCGATCGGCGTCGTCGCGGCGATCACGCCGTGGAATTTTCCTGCGGCGATGATCACCCGCAAGGTCGGTCCGGCGCTGGCCGCCGGCTGTACCGTGGTGTTGAAGCCGGCCCCGGAAACGCCACTAACCGCTTTGGCTCTAGCCGAACTGGCTCAGCGGGCAGGTTTCCCAGCCGGCACGATCAACGTGATCACGGGCGATGCCATTGCCATTGGCGGCGTTCTCACCAGCCATCCCAAGGTGCGCCTCGTCGGTTTTACCGGCTCCACCGAGGTCGGCAAGATCCTCATGCGCCAGTCGGCAGGGACGGTGAAGAAGGTGGCGCTCGAACTTGGGGGCAATGCGCCCTTCATCGTGTTCGACGACGCCGATATCGACGCTGCGGTCGAGGGTGCGATTCTCGCCAAGTTCCGGAATATGGGCCAGACCTGCGTCTGTACCAACCGTATCTATGTTCAGGACAAGGTTCACGACGCCTTCGTGGCCAAGCTGATCGAAAGGGTCCGCGCCCTCAAGGTCGGCGATGGCTTTGCCGAAGGCGTCATGCAGGGGCCGCTGATCACCGAGGAAGCCGTTGCCAAGGTCGAAAGCCACATTGCGGATGCCATCGCAAAGGGCGCCCGGATCGAGGTCGGCGGCAAGCGCCATGCTCTTGGCCAGACGTTCTTCGAGCCGACCGTGCTTACTGGCGCGACCGGCGAGATGACGCTGGCGGGCGAAGAGACTTTTGGTCCGCTTGCCCCGGTTTTCCGCTTTACCGACGAAGATGAAGTGGTGGCGGCCGCCAACGATACGGAGACGGGCCTTGCCGCCTATTTCTATTCGCGCGACGTCGCCCGGCTCTTCCGCGTCATGGAGCGGCTCGAATATGGGATGGTCGGGATCAATACCGGCTTGATCTCCACCGAGCTCGCGCCGTTCGGCGGCGTCAAGGAGAGCGGCAACTCCCGCGAAGGGTCTCATCACGGCATTCTGGAGTTCACAGAACTCAAATACGCGTGCATTGGCGGGCTCGGTTAG
PROTEIN sequence
Length: 483
MHALTDPTLLRTQSLINGEFIGEGSVAVTNPATGEILAHVPNFGADEATRAVDVAASAFHPWAARTAKDRGAILRKWFDLIVANRRDLATILTSEQGKPFAEALGEIDYAASYVEFYAEEAKRIAGEMLPSHRSDARIMVLRQPIGVVAAITPWNFPAAMITRKVGPALAAGCTVVLKPAPETPLTALALAELAQRAGFPAGTINVITGDAIAIGGVLTSHPKVRLVGFTGSTEVGKILMRQSAGTVKKVALELGGNAPFIVFDDADIDAAVEGAILAKFRNMGQTCVCTNRIYVQDKVHDAFVAKLIERVRALKVGDGFAEGVMQGPLITEEAVAKVESHIADAIAKGARIEVGGKRHALGQTFFEPTVLTGATGEMTLAGEETFGPLAPVFRFTDEDEVVAAANDTETGLAAYFYSRDVARLFRVMERLEYGMVGINTGLISTELAPFGGVKESGNSREGSHHGILEFTELKYACIGGLG*