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SCN18_25_8_15_R2_B_scaffold_1618_21

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(25095..25895)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter membrane protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0Q1_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 256.0
  • Bit_score: 254
  • Evalue 9.90e-65
ABC transporter permease {ECO:0000313|EMBL:KKC38137.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 258.0
  • Bit_score: 328
  • Evalue 5.80e-87
YbbM seven transmembrane helix protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 258.0
  • Bit_score: 246
  • Evalue 4.50e-63

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGAGCACGGGGTTCACGACGCTCGAATTGATCGTGGCGGCGGTGCTGGTGCTGACCAGCGCTGGCCTTTCGCTGATGCTGAAGCTGGGCATTCACCGCTCCATGCTGATCGCGGCGGCACGCATGGTAGTGCAATTGCTGCTGTTGGGGCTGCTACTGCGCAGCATTTTCGCCATGACCAATCCGTGGCTGACCGCGGGTCTCGTGGTGTTCATGGTGCTGGCCGCGAGCTATGAAGTGGCCGCACGGCAGGAGCGCAAGCTAGCCGGCGGCTGGACCTTTCTGGTCAGCGGCGCTGCGGTCAGTGCCTCTACGCTGTTCGTCTCGCTGTTTGCGCTGGGCAGTGTGTCGCTGACGCAGGACTGGACGGCGCCGCAGGTGGTCATTCCGATCGCCGGCATCGTGCTGGGAACCGCGATGAATGCGGCGAGCGTGGGCCTTACGGCGCTGATGGACGGGCTGGTCTCGGAGCGCGATGCCATCGAGGCGCAGCTGGCACTGGGCCATAGCAAGCGCCAGGCCATGCAGAGGCTGATGCAGAGGGCGGCGCGCACCGGCACGATCAATGTCATCAACCAGATGGCGGGCGCCGGGATCATCACCCTGCCCGGGATCATGAGCGGCCAGGTGCTGGCCGGGCAGGATCCGCTGGTGGCGGCGCAATCACAGATTTTCCTGATGTTCCTGCTCGGCGCCGTCTCGACGGCCAGCATTGTCATCGCCATAACGCTGGCCCTGACCCGTCTCACCGACGAGCGTCACCGGCTGCGGCTGGATCACCTGCAGGGAGAATTGGGATGA
PROTEIN sequence
Length: 267
MSTGFTTLELIVAAVLVLTSAGLSLMLKLGIHRSMLIAAARMVVQLLLLGLLLRSIFAMTNPWLTAGLVVFMVLAASYEVAARQERKLAGGWTFLVSGAAVSASTLFVSLFALGSVSLTQDWTAPQVVIPIAGIVLGTAMNAASVGLTALMDGLVSERDAIEAQLALGHSKRQAMQRLMQRAARTGTINVINQMAGAGIITLPGIMSGQVLAGQDPLVAAQSQIFLMFLLGAVSTASIVIAITLALTRLTDERHRLRLDHLQGELG*