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SCN18_25_8_15_R2_B_scaffold_2789_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(7926..8993)

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG75_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 357.0
  • Bit_score: 303
  • Evalue 1.90e-79
Uncharacterized protein {ECO:0000313|EMBL:KFL29915.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 356.0
  • Bit_score: 551
  • Evalue 5.60e-154
substrate-binding region of ABC-type glycine betaine transport system similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 357.0
  • Bit_score: 303
  • Evalue 5.40e-80

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGCGATTTAGGCACCCTGTCATTGGCGGTCTCTTGCTGGCGCTGCTTGTCGGGCCGGCGCTGGCACAGATCACCATCCTCGACACGGCGCAGGATCGCGTCAACGGCGCGCCAGGGACTCAGTCGCCGGCGCCGGCTGCGGTGCCGGAAACGCCCGTCGCTCCCGCCCCACCACCGCCTTGCGGCACCCAAAACATGACTATTGCCCGCATGAGCTGGCCGTCGGCGAGCCTTCTGGCGGAAATTCACGCACGCCTTCTCAGCCAAGAGTTCGGATGCGAGGCGCGGGTGGTGCCCGGAGACCTCGCGGCGACGGCATCGTCCATGGGCTCGACTGGACAGCCGGCGGTGGCGCCGGAAATGTGGGTGACGCGGATCGCCGATGTGTGGAATGGTGCCATCCAGACGCAGATGCTGCGCAGCGCCGCGCCAACCTTTGCCGAGGCGACGACAGAAGGCTGGTTCATTCCCGCTTATATGCAGGGGGCGTTTTCGGGTACGGCAAGTGCTGCGGCCCTGCAGCCGCTGCTTTCGACCCAGACCAGCGAAACGCCGGTGCGTTTCATTTCCTGTCCGCTCGACTGGGCCTGCTCGGTCATCAATCGCAATCTGATCAAGGCCTATGGCCTGACGGACCTGTTGCAGGTGGTGGAGCCGGCCAATCGCTTTGAAATGGATACGCTGATCGCTGAGGCTGTCAGCCGGCACGAGAACTTCTTCTTCTATTATTGGCAGCCCAATGCAGTACTGGCTCAGCTTGATTTTCGGCCGCTCGACATGGGTGGCTATGACGAAGAGGCAATGAAGTGCCTGGCGCTGCTCTCCTGTGCCGCGCCAAAACCTTCTGCCTTTCCGGCCGAGATGATCGTTGTGGCGGTATCCGAATGGGTGTTTGCGGAGGCGCCCGCGGTCGCCTCCTACTTGCAGCGGGCTACCATGCCCGTCGGAGAAATGGATCGGTTGCTTGCCCAGCTCAACGAACCGGGGGCGACCGTCGAAGATGTGGCGGCGCGCTTCGTCGCCCGGCGCGGTGATCTCTGGCGCAAGTGGACCGGTAGCGCGCCCTGA
PROTEIN sequence
Length: 356
MRFRHPVIGGLLLALLVGPALAQITILDTAQDRVNGAPGTQSPAPAAVPETPVAPAPPPPCGTQNMTIARMSWPSASLLAEIHARLLSQEFGCEARVVPGDLAATASSMGSTGQPAVAPEMWVTRIADVWNGAIQTQMLRSAAPTFAEATTEGWFIPAYMQGAFSGTASAAALQPLLSTQTSETPVRFISCPLDWACSVINRNLIKAYGLTDLLQVVEPANRFEMDTLIAEAVSRHENFFFYYWQPNAVLAQLDFRPLDMGGYDEEAMKCLALLSCAAPKPSAFPAEMIVVAVSEWVFAEAPAVASYLQRATMPVGEMDRLLAQLNEPGATVEDVAARFVARRGDLWRKWTGSAP*