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SCN18_25_8_15_R2_B_scaffold_4797_4

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 2884..3621

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 245.0
  • Bit_score: 470
  • Evalue 1.10e-129
tRNA pseudouridine synthase A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 245.0
  • Bit_score: 357
  • Evalue 7.70e-96
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 245.0
  • Bit_score: 357
  • Evalue 2.20e-96

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCACGCTATCGCATCACCATCGAATATGACGGCACGCCCTTCTGCGGCTGGCAGCGCCAGGCCGATCGGATGAGCGTGCAGCAAGCCCTCGAAGACGCGATCTTCCGCTTCTCGGGCGAAACGGTTTCAACGCAAGCCTCCGGCCGCACCGATGCCGGCGTGCATGCCCTGGGCCAGGTCGTCAGCTTTGACCTCTCCACCGACCGCGACCCGTTCCGAGTGCGCGAGGCGCTCAATTATCACCTGCGCCCGCATCCCGCCGCCGTCATCGACTGCGAAGTGGTCTCCGAGACCTTCGAGGCCCGCTTCTCGGCCCTCGCGCGTCACTACGAGTACCGCATCCTCAATCGCCGCGCCCCCGCCGCGCTCGAGCGCCATCAGGTCTGGCACGTCCCCATGCCGCTCGACGCCGAAGTGATGCACCTCGCCGCGCAGAAAATTCTCGGCCGCCACGATTTCACGACCTTCCGCTCCTCCGAGTGCCAGGCCAATTCGCCCATCCGCACGCTCGACCACTTTGCCGTGCGCCGTGAACTCGACCATATCGTCGTCACCGCCAGTGCCCGCAGCTTCCTGCACCATCAGGTGCGCTCCATGGTCGGTTCGCTGAAACTCGTGGGTGAGGGCAAATGGAGCCCGGCCGATTTCCGCGCCGCGCTTGATGCGGCCGACCGCAGCCGCTGCGGCGCCATGGCGCCATCAGCGGGGCTCTACTTTGTGAAAGTCGACTACTAG
PROTEIN sequence
Length: 246
MPRYRITIEYDGTPFCGWQRQADRMSVQQALEDAIFRFSGETVSTQASGRTDAGVHALGQVVSFDLSTDRDPFRVREALNYHLRPHPAAVIDCEVVSETFEARFSALARHYEYRILNRRAPAALERHQVWHVPMPLDAEVMHLAAQKILGRHDFTTFRSSECQANSPIRTLDHFAVRRELDHIVVTASARSFLHHQVRSMVGSLKLVGEGKWSPADFRAALDAADRSRCGAMAPSAGLYFVKVDY*