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SCN18_25_8_15_R2_B_scaffold_3087_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(4991..5959)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 322.0
  • Bit_score: 604
  • Evalue 8.70e-170
Uroporphyrinogen decarboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 319.0
  • Bit_score: 460
  • Evalue 8.50e-127
uroporphyrinogen III decarboxylase similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 319.0
  • Bit_score: 460
  • Evalue 2.40e-127

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGTGGATCATGCGACAGGCGGGACGCTATCTGCCGGAATATCGCGAACTCCGCGCCAAGGCCGGAAGTTTTCTCGACCTTTGCTACAATCCGGAATTTGCGACTGAGGTAACGCTGCAGCCGCTTCGCCGGTTCGATCTCGACGCGGCTATCTTGTTCTCCGACATTCTGGTCATTCCCGATGCACTGGGACAGAAGGTTCGCTTTGAGCAGGGCGAAGGACCAGTCCTCGAGCCTCTGGCCGTAACCGATGTCGATCGGCTTGAGCGCGGTGAGGCTTTGGAGCATCTGGCGCCTGTCCTAGAGACCGTGCGTCGGCTACGGGCGACACTGGCTCCCGAAAAGACACTTATCGGCTTCTGTGGCTCTCCCTGGACGGTTGCGACCTATATGCTCAACGGCCGGGGATCGCCGGACCAATGGGTGGCGCGTCGCTTTGCGCTCGAACACCCTGCGGCGTTTGCGAAACTGATGGATGTGCTGGTTCAGACCAGCATTGACTATCTGGTTGCCCAGTTTGAGGCTGGCGCCGATGTGGTGCAGCTTTTTGAAAGCTGGGCGCTCAATCTCGACGATGCGGCTTTCACGGCGCAGGTGATTGAACCCAACCGTCGCATTGTCGAAGGCGTGCGTGCCAGAATCCCGAATGCGCCGATCATCGGCTTTCCGCGCGGTGCGGCCGGCAATTTGAAACGCTATGCTGAGAAGACCGGCGTCAATGCGCTGGGCCTTGACTATGCGACGCCACTTTCCTTTGCCGACGAGTTCCTGCCAAAAAGCCTGCCGGTGCAGGGCAATCTCGATCCGTTGCGGCTGGTGATCGGCGGCAAGGCGATGGAAGAGCGCGTGATCGAGATCAAGGCGGCGTTTGCGAACCGCCCGCATATCTTTAACCTCGGCCACGGCATTGTGCCGGAAACCCCGATTTCCCACGTCGAGCGGTTGGTCGAGCTGGTCAAGCAAAGTTGA
PROTEIN sequence
Length: 323
MWIMRQAGRYLPEYRELRAKAGSFLDLCYNPEFATEVTLQPLRRFDLDAAILFSDILVIPDALGQKVRFEQGEGPVLEPLAVTDVDRLERGEALEHLAPVLETVRRLRATLAPEKTLIGFCGSPWTVATYMLNGRGSPDQWVARRFALEHPAAFAKLMDVLVQTSIDYLVAQFEAGADVVQLFESWALNLDDAAFTAQVIEPNRRIVEGVRARIPNAPIIGFPRGAAGNLKRYAEKTGVNALGLDYATPLSFADEFLPKSLPVQGNLDPLRLVIGGKAMEERVIEIKAAFANRPHIFNLGHGIVPETPISHVERLVELVKQS*