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SCN18_25_8_15_R2_B_scaffold_5649_7

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 3944..5053

Top 3 Functional Annotations

Value Algorithm Source
Putative component of multidrug efflux system (RND family) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S3D3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 368.0
  • Bit_score: 263
  • Evalue 1.70e-67
Acriflavin resistance protein {ECO:0000313|EMBL:ETR75650.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 338.0
  • Bit_score: 265
  • Evalue 8.40e-68
RND efflux membrane protein similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 347.0
  • Bit_score: 261
  • Evalue 2.40e-67

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGACGGCAACTCACCTGCGCCTACCCTCTGCTTCAAGAACAACGAGGAAGGCAATAGCCCTGCTCTGTTGCGCTGGAGTTCTGGCCGGTTGTCAGCCAGCTGCGGAAACGCCTGAGAAAAAGCCACTTCTCGTTGATGCTGTAGTTGCTGAGTTAAGCGACTACTCGTCGCGCATCACGCTGACGGGTGAGATAAGGGCAAATACTTCGACAGACCTCGCATTCCAAACAAGTGGTCAAGTCGTTGAGCGCTTTGTGGAAGTGGGGGACAAAGTCGACGTGAACCAAATTCTGGCTCGTTTGAGTTCATCTGAGCAAGCTGCCGATCGGGATGCGGCACAGGCGGCTTTGGAAGCAGCGCAGTTCGCTCTCGATCAGGCAAGAACGAATTTGGGCAGGCAGCAGGGTCTGCTGGACCAGGGCCTCACCACGCAAAGTTCATATGACTCCGCGTCCGAAGCTGTTTCTACGGCAAGTAGCGCCGTGGATGCCGCGCAGGTTACGCTCGAGCGCTCTGCAGAAGCGATCGATCAGACCTCGCTCCGAGCTTTCGTCAAAGGAACGATCATTGATCGACAGATCGAAGTGGGGCAGGTGATACAAGCTGGACAGCCAGCGTACACCGTTGCTGCGGACGGTCCTCGCGAGGCAGTCTTTGCAGTCGATGAGGGTGTTTTGAGCGATGCCTTGGCTGCCCAGAGTTTTGTCGTTCGATCTGTGAACGATGCAAGCTCAACAGCCGCTGCTACGCTTAGCGAAATCTCGCCAACCATTAATAAATCCACTGGAAGCGTGGAAATCAAAATGACCGTCAGCTCGCCTCCGGAGGCGATGTCCCTCGGATCCGTGGTGACAACAAGCGGGATTTACGCAACCATTCAAGCCGTTGTCGTGCCTGCATCGGCCCTGACGTCTGAAGATGCCCTTGCTGCCGTTTGGGTGATTGACCCTCAAAGTCACGTGGCCACTAGACGCAAGGTTGAACTTGCGGCCTTCGACAATGATTCTTTGGTAATCAGCGGCGGCATTTCACCTGGGGACTTGGTAGTCACCGCCGGAGCGAACCTTTTATTTCCCGGCCAACCCGTTCGTGTGAAACAAGAACAATGA
PROTEIN sequence
Length: 370
MTATHLRLPSASRTTRKAIALLCCAGVLAGCQPAAETPEKKPLLVDAVVAELSDYSSRITLTGEIRANTSTDLAFQTSGQVVERFVEVGDKVDVNQILARLSSSEQAADRDAAQAALEAAQFALDQARTNLGRQQGLLDQGLTTQSSYDSASEAVSTASSAVDAAQVTLERSAEAIDQTSLRAFVKGTIIDRQIEVGQVIQAGQPAYTVAADGPREAVFAVDEGVLSDALAAQSFVVRSVNDASSTAAATLSEISPTINKSTGSVEIKMTVSSPPEAMSLGSVVTTSGIYATIQAVVVPASALTSEDALAAVWVIDPQSHVATRRKVELAAFDNDSLVISGGISPGDLVVTAGANLLFPGQPVRVKQEQ*