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SCN18_25_8_15_R2_B_scaffold_4258_11

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 10762..10974

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 71.0
  • Bit_score: 138
  • Evalue 3.00e-30
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFV0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 72.0
  • Bit_score: 100
  • Evalue 6.40e-19
cell division protein FtsJ / ribosomal RNA large subunit methyltransferase J similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 72.0
  • Bit_score: 100
  • Evalue 1.80e-19

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGTGGATAAAGCCCTCGGCACCGGTGGCCGGAAATCCGACCGGGACCTGAAAATCCGGCTCAAGACGGCCAAGGGGCGGACGACCTCGTCCACCAAGTGGCTGCAGCGCCAGCTCAACGATCCCTACGTGGCTCGCGCCCGTTCGGAAGGCTATCGCTCGCGCGCGGCTTTCAAGATCAAGGAAATCGACGACAAGCATAAGCTCTTCAGG
PROTEIN sequence
Length: 71
MVDKALGTGGRKSDRDLKIRLKTAKGRTTSSTKWLQRQLNDPYVARARSEGYRSRAAFKIKEIDDKHKLFR