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SCN18_25_8_15_R2_B_scaffold_5174_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(4832..5332)

Top 3 Functional Annotations

Value Algorithm Source
SsrA-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R615_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 156.0
  • Bit_score: 219
  • Evalue 1.30e-54
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 166.0
  • Bit_score: 313
  • Evalue 1.60e-82
tmRNA-binding protein SmpB similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 156.0
  • Bit_score: 219
  • Evalue 3.70e-55

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGCACAGCAGAAGAACGACAAGAACAAGAACGGATGGATCAGCCACGGTCTCGTGGCTGAAAACCGTCGTGCGCGTTTTGACTATGAAATCGGCGACACCCTCGAGGCCGGCATCGAATTGACCGGCACCGAGGTCAAATCGCTGCGCCTCGGGAAGGCGCAGATCGCCGAATCCTACGCCTCCCCCGAAAAGGGCGAGCTCTGGCTGATCAATTCCCACATCCAGGAATATCTCCAGGCCAACCGCTTCAATCATCAGGAAAAGCGCCCGCGCAAACTCCTCGTGAGCAAGAAGCAACTGGCTCGCCTCGATCAAGAAGTCGCCCGCGCCGGCCATACGATCGTGCCCCTGAAACTCTATTTCAACGATCAGGGCCGCGCCAAGCTGCTCATCGGCATCGGCAAGGGCAAGAAAAACTACGACAAGCGCGCCACCAGCCGCGACCGCGATTGGAGCCGCGACAAGGCCCGCATCATGAAGGAAGGCGGGCGCGGCTGA
PROTEIN sequence
Length: 167
MAQQKNDKNKNGWISHGLVAENRRARFDYEIGDTLEAGIELTGTEVKSLRLGKAQIAESYASPEKGELWLINSHIQEYLQANRFNHQEKRPRKLLVSKKQLARLDQEVARAGHTIVPLKLYFNDQGRAKLLIGIGKGKKNYDKRATSRDRDWSRDKARIMKEGGRG*