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SCN18_25_8_15_R2_B_scaffold_8853_4

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(2352..3389)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor containing a TPR repeat domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFN0_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 345.0
  • Bit_score: 379
  • Evalue 2.70e-102
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KFL31965.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 345.0
  • Bit_score: 637
  • Evalue 9.90e-180
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 345.0
  • Bit_score: 379
  • Evalue 7.50e-103

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Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
CGTCGCCGCCAGACCGATGCCTACCGCCGCAACAGCACCAGCAAAGTCGGCGAAAGGCACCTCACCCTGATGCGCGAAGAACTGGACGATCTCGCCATGACTCCGGACGCCATCCCCGATCGCCGCCTCGCCTTGATGTTCGCCTGCGCCCATCCCGACATCGACCCGTCCCTCCGCAGCCCGCTGATCCTCCAGACCATCCTCGGCCTCACCGCCGCCGATATCGGCGCCGCCTTCCTCATCCCTGCCGCCACCATGGGCCAGCGCCTTGTCCGCGCCAAATCGCGCATTGCCGAACTCGGCATCGCCTTCGAAATCCCCGACACGGAAGACCTGCCCGACCGCCTCGACGCCGTCCTCGAAGCCATCTACGCCGCCTATTCAAAGGGCTGGAACGATCTCGTCGGCGAAGCCGGCGGCCAGCTTGCCGAAGAAGCCATCTGGCTCGGCCGCCTCGTCGCCTCGCTCCTGCCAGCCTCGCCCGAAGCCAAGGGCATGCTGGCCCTTATGCTCTACTCCGACGCCCGCCGCGCCGCTCGCCGCAGCCCCACCGGCGCCTATGTGCCGCTCGACGAGCAGGACACCGCCCTTTGGGACATGGAGGCCATCGAAACCGCAGAATCCCTCCTCCGCGCCGCCAGCAGCGCCGGCCCTACCGGCCGCTGCCAGCTCGAAGCCGCCATCCAGTCCGCCCACATCGTCCGGCGCCTCACCGGCACGAACAACTGGCCGATCGTGGTAAAGCTCTACGACATCCTCCTTGCCATGACCGGCTCCCCTGTCGTCCTCCTCAACCGCGCCGCCGCCCTCGCCGAAACCGATGGTCCAGCCGCGGCTCTCCAAAGCATCGCACCCCTTGCCGAGGACAAACGCATGGCCGACTACCAACCCTATTGGGCCGTCCGCGGCCGGCTGCTTGCCGAAACCGGTAACCGCGAAGCTGCGCATGAAGCACTGACACTAGCCATGGGCCTTTCCACCGACCCGGCAATCCGCCATTGGCTGGATGCGAGGCGGGCGGAGCTGATAGTGGGGTGA
PROTEIN sequence
Length: 346
RRRQTDAYRRNSTSKVGERHLTLMREELDDLAMTPDAIPDRRLALMFACAHPDIDPSLRSPLILQTILGLTAADIGAAFLIPAATMGQRLVRAKSRIAELGIAFEIPDTEDLPDRLDAVLEAIYAAYSKGWNDLVGEAGGQLAEEAIWLGRLVASLLPASPEAKGMLALMLYSDARRAARRSPTGAYVPLDEQDTALWDMEAIETAESLLRAASSAGPTGRCQLEAAIQSAHIVRRLTGTNNWPIVVKLYDILLAMTGSPVVLLNRAAALAETDGPAAALQSIAPLAEDKRMADYQPYWAVRGRLLAETGNREAAHEALTLAMGLSTDPAIRHWLDARRAELIVG*