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SCN18_25_8_15_R2_B_scaffold_1127_15

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 10793..12058

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 421.0
  • Bit_score: 796
  • Evalue 1.60e-227
Transcription termination factor Rho n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ03_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 421.0
  • Bit_score: 759
  • Evalue 1.50e-216
rho; Transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 421.0
  • Bit_score: 753
  • Evalue 3.10e-215

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCGGGAAATCAAGCTCCAAGAGCTCAAGAGCAAGTCGCCGACCGAACTTCTGGCCTTCGCCGAGGAAGTCGAGGTCGAGAATGCCAGCACCATGCGCAAGCAGGAGCTGATGTTCGCCATCCTCAAGCAGCTCGCCGCGCGCGAGACCGAGATCCTGGGCGAAGGCGTCGTCGAGGTTTTGCAGGACGGTTTCGGCTTCCTGCGCTCGTCCGATTCGAACTATCTGCCGGGCCCGGACGACATCTACGTCTCGCCGTCGCAGATTCGGAAGTTCGGGCTGCGCACCGGCGATACGGTTGAGGGACCGATCCGCGGCCCGAAGGATGGCGAACGCTATTTTGCCCTGCTCAAGGTCAACTCGATCAATTTCGAGGACCCGGAGAAGATCAAGCACAAGATTCATTTCGACAACCTGACGCCGCTCTATCCGGACGAGCGCCTGAAGCTCGAGGTCCAGGATCCGACGAAGAAGGATTTCTCGCCGCGGGTCATCGACATCGTTGCGCCGATCGGCAAGGGCCAGCGCGCGCTCATCGTTGCGCCCCCGCGCACGGGCAAGACGGTACTGCTCCAGAACATCGCCCAGTCGATCACCAGCAATCACCCCGAGTGCTATCTGATCGTGCTGCTGATCGACGAGCGCCCGGAAGAAGTTACGGACATGCAGCGCTCGGTGAAGGGCGAGGTCGTCTCCTCGACCTTCGACGAGCCGGCGTCCCGCCACGTCCAGGTCGCCGAGATGGTGATCGAAAAGGCCAAGCGCTTGGTTGAGCATGGCCGCGACGTCGTGATCCTGCTGGACTCGATCACCCGTCTCGGCCGCGCCTACAACACGGTGGTTCCCTCCTCCGGCAAGGTTCTGACCGGTGGTGTCGATGCCAACGCACTACAGCGGCCGAAGCGCTTCTTCGGCGCGGCCCGCAATATCGAGGAAGGCGGGTCGCTGACGATCGTTGCGACGGCGCTGATCGATACCGGCTCGCGCATGGACGAGGTGATCTTCGAAGAGTTCAAGGGCACCGGCAACTCGGAAATCGTTCTCGACCGCAAGGTGGCCGACAAGCGCATCTTCCCGGCGATCGACATCCTCAAGTCCGGCACCCGCAAGGAGGAGCTCATCACGCCGCGCTCCGACCTGCAGAAGACCTATGTCCTGCGCCGCATCCTCAACCCGATGGGTCCGCAGGACGCGATCGAATTCCTCATCGACAAGCTGCGCCAGACCAAGCAAAACTCGGAATTCTTCGATTCGATGAACACCTGA
PROTEIN sequence
Length: 422
MREIKLQELKSKSPTELLAFAEEVEVENASTMRKQELMFAILKQLAARETEILGEGVVEVLQDGFGFLRSSDSNYLPGPDDIYVSPSQIRKFGLRTGDTVEGPIRGPKDGERYFALLKVNSINFEDPEKIKHKIHFDNLTPLYPDERLKLEVQDPTKKDFSPRVIDIVAPIGKGQRALIVAPPRTGKTVLLQNIAQSITSNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPASRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIVATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAIDILKSGTRKEELITPRSDLQKTYVLRRILNPMGPQDAIEFLIDKLRQTKQNSEFFDSMNT*