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SCN18_25_8_15_R2_B_scaffold_1188_17

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 20605..22464

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIG8_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 638.0
  • Bit_score: 612
  • Evalue 4.40e-172
ImpA family type VI secretion-associated protein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 638.0
  • Bit_score: 612
  • Evalue 1.20e-172
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:ACK51287.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 638.0
  • Bit_score: 612
  • Evalue 6.10e-172

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGCCCTCCGCCCTCAGGCAAGAAAATAGTACTGCGTCTTTCTCTACACCCAAGGGAAAGGACGAATTTACAATTATCAAATTCGAAGCCACCGAAGCTCTGAGCGAATTATTTACTTATAACATCGAAGCGGCAAGCAAAACTGAAAACGCCGACCTGCAAAGCATCATGAGCGAAAAATGCGCGATCAAGTTCACGCTCAAGAACAAGAGCGAGCGCGTTTTGAACGGCACGCTTGTCGACGCGCAATGGCTCGGCCAGCAGGACGATCTTTATATTTACCGCTTCACGCTCAAGCCTTGGCTCTGGCTGCTCTCGCAGCGCGCCGATTGCCGGATTTTCAAGAACAAGACCGCCTTGGACATCATCAAGGAGATCTTCAAGAAGGAGGGCTCCGCGAGTTTCGACGATCGCACCAGCGAGACGCTCCAGCCTGTCGACTACTGCGTCCAGTATCGCGAGACCGATCTCGACTTCGTGCTGCGGCTGATGGAGCAGTACGGCATCTACTATTATTTCAAGCACAGCGACGGCGACCACAAGCTCGTGCTCTGCGATTCCCGCTCCGCCCATGACCAGGTCCAGGCTGCGGCCGAACCGAGCTTCCAGGGCGACGCCTCGGGCTACGCCTTCGTGCCGCAAGGCAACCGCTTTCCGCGCAGTACCGTCGAGCATCTGACGCACTGGTCGACGATCCGCCGCCTGCGCACCGGCAAGTTCGAGCTCAAGGACTATGATTTCGAGAAATCGGAATCAGACCTCACAGCGCGTGCCGAGGAAGGCTTTCCGAAGGCCAAGTCCTACGAGGCCTATGACTACCCGGCTGCCTACACCAAGCGCGACCAGGGCGAGCATTTCGCCCGCGTGATGGCCCAGGCCGAACAGGCGCAGGACGATCGCCGCTATGCCGGCGGCGACGCCGCGAGCCTCTATCCGGGCGCGCTGATGAAGCTGATCGACCACCCGACCGGCGCCGAGAACAGCGAATACATCGTCGTCCGCGCGACCCACGCCTATGGTATCCAGAGCTATCGCTCGTCCGGGCGCCGGGACGAGGCGCTCTATCACGGCTCCTATGAGCTCCAGAAAAGCGACAAGCGCTTCCGCGCGCCGATCGTGACGCCCCGCCCGACCGTCTACGGGCCGCATACCGCCAAGGTCGTCGGCGAGAAGAACAAGGGCGAGGAAGGCGATATCGACGTCGACGAATACGGCCGCATCTGGCTGCGCTTCCACTGGGACCGCGAGGATGGCTCGACCTCCTGCCGCACCCGCGTCGCGCAGATGTGGGCCGGCAAAGGCTGGGGCGGGCAGGTCATCCCCCGCATCGGCCAGGAGGTGATCGTCGAGTACATCGAGGGCAACCCGGACCTGCCGCTCGTCGTCGGCGCCGTGGTCAACGACCAGCACAAGCCGCCCTACGAGTTGCCGGCGAACAAGACCCAGTCCGGCCTCAAGTCGGAATCGACCGATGGAGCCGGTTTCTCCGACACCTATAACGAGATCAAGTTCGAGGACCGCAAGGACCAGGAAGTCCTGGAGATCAGGACGGAGAAGGACCACAAGGTCACGGTCAACAACATCGAGACCCGCGATATCGGCGAACGCTTCCAGGGCATGGGCTATTCGCGCGAAACCACGTTGAAGCTCGGCGACGACAAGCTCGACATCCAGAACGGCAAGCTCGACGTCGAGGCGCTCCGGGAGATCAATCTCAAGGTCGGGCAGAGCACGATCAAGATGACGCCCGGCAGCATCGAGATCACCTCGCCGAAGATCACGATCCATAGCCAGGCGCTGACGGAGGTGAAGAGCGACGGCATCCTCACCATCAACGCCCCGATGGTGAACATCAACTGA
PROTEIN sequence
Length: 620
MPSALRQENSTASFSTPKGKDEFTIIKFEATEALSELFTYNIEAASKTENADLQSIMSEKCAIKFTLKNKSERVLNGTLVDAQWLGQQDDLYIYRFTLKPWLWLLSQRADCRIFKNKTALDIIKEIFKKEGSASFDDRTSETLQPVDYCVQYRETDLDFVLRLMEQYGIYYYFKHSDGDHKLVLCDSRSAHDQVQAAAEPSFQGDASGYAFVPQGNRFPRSTVEHLTHWSTIRRLRTGKFELKDYDFEKSESDLTARAEEGFPKAKSYEAYDYPAAYTKRDQGEHFARVMAQAEQAQDDRRYAGGDAASLYPGALMKLIDHPTGAENSEYIVVRATHAYGIQSYRSSGRRDEALYHGSYELQKSDKRFRAPIVTPRPTVYGPHTAKVVGEKNKGEEGDIDVDEYGRIWLRFHWDREDGSTSCRTRVAQMWAGKGWGGQVIPRIGQEVIVEYIEGNPDLPLVVGAVVNDQHKPPYELPANKTQSGLKSESTDGAGFSDTYNEIKFEDRKDQEVLEIRTEKDHKVTVNNIETRDIGERFQGMGYSRETTLKLGDDKLDIQNGKLDVEALREINLKVGQSTIKMTPGSIEITSPKITIHSQALTEVKSDGILTINAPMVNIN*