ggKbase home page

SCN18_30_10_14_R5_P_scaffold_242_8

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: 5004..5897

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen-III synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEX7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 297.0
  • Bit_score: 348
  • Evalue 5.60e-93
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR77128.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 297.0
  • Bit_score: 352
  • Evalue 5.50e-94
cmpR; LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 294.0
  • Bit_score: 334
  • Evalue 3.10e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCGCGGCCTCAATCTCGACCATGTCAGGGCCTTCACCGAAGTGGCGCGGCTCGGCACCTTCTCGGCAGCGGCCGAACAGCTCAACCTGACGCAGCCCGCGATCAGCCAGCAGATTGCTCAACTGGAGAAGCGACTCGGGGTGGCGCTGGTCGAGCGGCTGGGCCGCCGTGCCACGCCGACAGCAGCCGGCCTCGAACTGCTCGACCATGCCGCGCGTATCGACGGCGCGGTGACGGCCGCCCTGGAGCAGCTTGCGCACTACAAGAGCGGCGAAGTCGGCCGTGTGCGTTTGGGGACGGGCGCAACGGCGGCAATCTTCCGCCTGCCGCAGATGCTGCGCCGATTGCGCCAACGCCTGCCGTCGCTGGAAATCACCATCGCCACGGGCAACACCTCCGATGTCGTGAAGGCCGTGCAGGACAATGCGCTCGACGTCGCGCTGGTGACGCTGCCAGCGGGAGGCCGCAATCTCGAGGTGACGCCGGTGCTGGACGACGAGTTCGTTGCGGTGACGTCGCGCGACGGCGTGAAGCTGCCGGCACGCGTTACGCCCGAAGTGATGGCGCGTCTGCCGGTGATCATGTTCGAGCCGGGCGGCCAGACGCGTCTGGTGACCGATCAATGGTTCTTTCAAGGCGGCGTCGAACTCCGGCCCAGCATGTCGCTGGGCAGCGTGGAGGCGATCAAGCGGCTGGTCGGCGTAGGGCTGGGCTGTGCGATCTTGCCGGCCGTGGCGTTGCGAGAGCCAGGCGATCGAGCGCGCCTCGTGGTGCGCCGCCTGACGCCCAGGCTCTATCGCAAGCTCGCCATCGTGGTCCGCCGCGACAAGGTCCTGCAGCGCGGCCTTCGCGAGACGGTGAAGGCCCTGCACGAGCTGGCCGAAAAATCCTGA
PROTEIN sequence
Length: 298
MRGLNLDHVRAFTEVARLGTFSAAAEQLNLTQPAISQQIAQLEKRLGVALVERLGRRATPTAAGLELLDHAARIDGAVTAALEQLAHYKSGEVGRVRLGTGATAAIFRLPQMLRRLRQRLPSLEITIATGNTSDVVKAVQDNALDVALVTLPAGGRNLEVTPVLDDEFVAVTSRDGVKLPARVTPEVMARLPVIMFEPGGQTRLVTDQWFFQGGVELRPSMSLGSVEAIKRLVGVGLGCAILPAVALREPGDRARLVVRRLTPRLYRKLAIVVRRDKVLQRGLRETVKALHELAEKS*