ggKbase home page

SCN18_30_10_14_R5_P_scaffold_424_23

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(22759..23937)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038006E1 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 390.0
  • Bit_score: 441
  • Evalue 8.40e-121
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 395.0
  • Bit_score: 433
  • Evalue 5.00e-119
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACF00478.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 395.0
  • Bit_score: 433
  • Evalue 2.50e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGTCGCCTGAGCAACCGCCTGCACCCCGACCGCGATCGCGACGTGGCCTCGCGATTGTCGGGATCATCTGTGGGCTGGCCCTTGTCGTGGTCGTGGCCGACGGCATCCGGGGCCGGCAGGCCAGCGAAGCCAAGCTCAAGGAGTGGACGGATACGCAGGCGGTCCCGACGGTCGCGCTGATCAGCCCCTCCCTGCAGGCCAACAAGAGCTATCTCGACCTGCCCGGACGCCTTGAAGCCTATTCGCGGGCGCCGATCTATGCGCGCGTCGGCGGCTTCCTGAAGGCCTGGCACGTCGATATCGGCACGCCGGTGAAGGCCGGGCAGCTTCTGGCCGAGATCGAGGCGCCCGACCTCGACCAGCAGCTCCTGCAGGCCAAGGCAGCGCTTGCGAGCGCCCAGGCGGCCGAAGCCCTGGCCACGGTGACGGCACAGCGCTGGCAGCAGCTCGGCAGCAGCAATGCCGTCTCGCGCCAGACCGTCGACGAGAAGACCGGCGACCTCACGGTCAAGCAGGCTCTGGCCAAGGCCGCTCAGGCGACGGTGGATCGGCTGGAAGTGCTGTCGGACTTCAAGCGCCTCGTGGCGCCTTTCGACGGTATCGTCACCACGCGCAACACCGATGTCGGGGCGCTGATCAATGCCGACTCGAGCGCCGGACTGGCTCTGTTCGTGATCTCCGACGTCCAGAAACTGCGCCTGTCGGTCAGTATCCCACAGAACTACGTGCCGGCGGTGCGGCTGAACACCAATGTGCAGATCACCGTCCCCGAGTATCCCGGCAAGGTCTACAACGGGCAGGTCGAGGCTTCGGCGCGTGCAGTCGATGCGCAGACCGGCACGACCCGCATGCAGGTCGTCGTCGACAACCGCAGCGGCGAGCTGATGCCCGGTGCTTTCGCCAACACGCGGATCGAGCTGCCGGCCAACACGCAGGCCCTGGCCATCCCGGCCGGTGCGTTGATCTTCGATCGCAAGGGGCTGCGCGTCGCCACCGTCGGCGCCGACAACAAGGTGACGCTGAAGCCCGTCACCATTGCCCGCGATCTCGGGCAGGTGGTCGAAATCGGTAGCGGCCTGACGGCAGAGGATCGCGTGATCGAAAGCCCGCCGGACGGTCTGGTCGATGGTGATCCCGTGCGTGTCGTGAATACCGCCAAGCCGCAAGCCGTGCGATAA
PROTEIN sequence
Length: 393
MSPEQPPAPRPRSRRGLAIVGIICGLALVVVVADGIRGRQASEAKLKEWTDTQAVPTVALISPSLQANKSYLDLPGRLEAYSRAPIYARVGGFLKAWHVDIGTPVKAGQLLAEIEAPDLDQQLLQAKAALASAQAAEALATVTAQRWQQLGSSNAVSRQTVDEKTGDLTVKQALAKAAQATVDRLEVLSDFKRLVAPFDGIVTTRNTDVGALINADSSAGLALFVISDVQKLRLSVSIPQNYVPAVRLNTNVQITVPEYPGKVYNGQVEASARAVDAQTGTTRMQVVVDNRSGELMPGAFANTRIELPANTQALAIPAGALIFDRKGLRVATVGADNKVTLKPVTIARDLGQVVEIGSGLTAEDRVIESPPDGLVDGDPVRVVNTAKPQAVR*