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SCN18_30_10_14_R5_P_scaffold_1257_4

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: 1249..1869

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=RL4_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 206.0
  • Bit_score: 266
  • Evalue 1.50e-68
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 206.0
  • Bit_score: 266
  • Evalue 4.20e-69
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 206.0
  • Bit_score: 374
  • Evalue 5.50e-101

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGAAGATCTCCGTTAAGACCATCGAAGGCGGCAGCGCCGGTGAGCTCGATCTCGCCGACGCCGTGTTTGCCGTCCCCGTCCGCAAGGACATCCTGCAGCGTTGTGTGGTGTGGCAGCTGTCGCGCCGCCAGCAGGGCACGCACAAGACCAAGGGTCGTTCCGAGATCACGGCGACGGCCAAGAAGATGTATGCCCAGAAGGGCACCGGCCGCGCCCGTCACGGCAACGAAGCTGCTCCGCAGTTCCGTGGTGGTGGCAAGGCGTTCGGTCCGGTCGTGCGCAGCCATGCCAGCGATCTGCCGAAGAAGGTCCGCCAGCTTGCGCTGCGTACCGCGCTGTCGGCCAAGGCGGCCGAGGGCAAGCTGATCGTGGTCGACGCCGCGACGCTGCCGGAGCCCAAGACGGCGAAGCTCAAGGGCCATTTCGGCAAGCTCGGCATCTCGAGCGTCCTGGTCATTGCCGGCGCCGAAGTCGACACCAACTTCGCCCGCGCCGCGGCCAACATCGCCCATGTCGATGTGCTGCCGCAGCAGGGTGCGAACGTCTACGACATCCTGCGTCGCGACACGCTGGTGCTGACGAAGGACGCCGTGAAGCATCTCGAGGAGCGTCTGCAATGA
PROTEIN sequence
Length: 207
MKISVKTIEGGSAGELDLADAVFAVPVRKDILQRCVVWQLSRRQQGTHKTKGRSEITATAKKMYAQKGTGRARHGNEAAPQFRGGGKAFGPVVRSHASDLPKKVRQLALRTALSAKAAEGKLIVVDAATLPEPKTAKLKGHFGKLGISSVLVIAGAEVDTNFARAAANIAHVDVLPQQGANVYDILRRDTLVLTKDAVKHLEERLQ*