ggKbase home page

SCN18_30_10_14_R5_P_scaffold_503_27

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(24877..26181)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UJM1_METS4 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 420.0
  • Bit_score: 503
  • Evalue 2.00e-139
PrsE-like type I secretion system membrane fusion protein (MFP) {ECO:0000313|EMBL:AHY52579.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 430.0
  • Bit_score: 508
  • Evalue 6.70e-141
HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 432.0
  • Bit_score: 505
  • Evalue 1.10e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGACCGGCCCGACGAACGTTCAGCATTCGACGCGCAAGCCCCTGATCCTGGGCTTCGTCGCCGTTGCCCTTCTCGTGGTCGGGATCGGTGGCTGGGCGGCCGCGACGCAGATTTCGGGCGCGGTGATCGCGCCGGGCAAGCTGGTGGTCGACAGCAACGTCAAGAAGGTCCAGCACCCGACGGGCGGTGTCGTGGGCGAGCTGTTGGTCAAGGAAGGTGACCGGGTACAGCAGGGCGATGTCGTGGTCCGGCTCGACGGCACACAGGCCCGTTCAAGCCTTGCTGTGGTCAACAAGGCGCTCGACGAGCTGGCCGCACGGCAGGCGCGTAATGAGGCCGAGCGCGACGGCGACAAGTCGGTGACGTTCCCGGCCGACCTCGTCGAACGCAAGGACGATCCTGAAGTGGCACGCCTGATGTCCGGCGAGCAGCGGCTGTTCGAGATGCGCAAGGCGGCGCGCGATGGGCAGAAGGCCCAGTTGCGCGAGCAGATCCAGCAGCTCCAGCTCCAGATCGAAGGCACGCAGGCTCAGGAGGCAGCCAAAACCAAGGAAGTGAAGCTCCTGATGCAGGAGCTCGAAAGCGTGCGGGTGCTGTGGAAGCAGAACCTCGTGCAGATCAGCAGGGTCACGGCGCTGGAGCGCGATGCCGCTCGCCTCGAAGGCGAGCGGGCGTCGCTGGTCGCCGCGATAGCACAGGGCCGCGGCCGCATCGCCGAACTCGAACTCAAGATCCATCAGATCGACCAGGACCTCAGCACCGAAGTCGGCAAGGAACTGGCCGAGATCCGCGCCAAGAAATCGGAGCTCACGGAGCGGCGCGTGTCTGCCGAGGATCAGCTCAAGCGCATCGACCTCGTGGCGCCTCAGGACGGCAGGGTCTTCCAGCGCAATGTGCATACGGTGGGTGGCGTCATCCAGGCGGGTGAGCCGGTCATGCTGATCGTGCCGCAGACGGAAGCGCTGATCGTCGAGGCCAAAGTGGCGCCGCACGATATCGACCAGATCCATATCGGCCAGCATGCCGTCCTGCGCTTCGCCGCCTTCAATCAGCGCACGACACCCGAACTCAACGGCGAGGTGATCCATATCGGCGCCGACGTCGCGCAGGACGACAAGGCAACGGAGCCTTACTATTCTGTGCGTGTCCGCGTCAGCGACGGCGAGCTTGCGCGCCTCGACGGACTGCAGCTTCTTGCCGGCATGCCGGTCGAGGTCTTCATTCAGACGACGCCGCGTACGGTTGCGTCGTTCCTCGTGAAGCCGCTCACGGACCAGCTTGCGCGCGCCTTCCGCGGCCGCTGA
PROTEIN sequence
Length: 435
MTGPTNVQHSTRKPLILGFVAVALLVVGIGGWAAATQISGAVIAPGKLVVDSNVKKVQHPTGGVVGELLVKEGDRVQQGDVVVRLDGTQARSSLAVVNKALDELAARQARNEAERDGDKSVTFPADLVERKDDPEVARLMSGEQRLFEMRKAARDGQKAQLREQIQQLQLQIEGTQAQEAAKTKEVKLLMQELESVRVLWKQNLVQISRVTALERDAARLEGERASLVAAIAQGRGRIAELELKIHQIDQDLSTEVGKELAEIRAKKSELTERRVSAEDQLKRIDLVAPQDGRVFQRNVHTVGGVIQAGEPVMLIVPQTEALIVEAKVAPHDIDQIHIGQHAVLRFAAFNQRTTPELNGEVIHIGADVAQDDKATEPYYSVRVRVSDGELARLDGLQLLAGMPVEVFIQTTPRTVASFLVKPLTDQLARAFRGR*