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SCN18_10_11_15_R1_B_scaffold_378_28

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 27383..28270

Top 3 Functional Annotations

Value Algorithm Source
Citrate lyase beta subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW76_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 289.0
  • Bit_score: 191
  • Evalue 8.80e-46
Citrate lyase beta subunit {ECO:0000313|EMBL:EIM28218.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 289.0
  • Bit_score: 191
  • Evalue 1.20e-45
HpcH/HpaI aldolase similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 297.0
  • Bit_score: 180
  • Evalue 5.70e-43

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGATGAAGCGATCCTGGCTTCTGGTCCCGGGACTGGACAAGGCCCTTCTGGGGGACAGCCGCCAGAGCGGCGCCGACGTGCTGGTCGCCGATCTCGCCAGCGTCGTGCCGCCGCTGAAGGCGCAGGCGCGCGAGGCAACCCAGCAATTCCTCAGCGACCGTCCCGCCATCCGCGAGCGCGAGGCGCGCTGCTTCGTGCTGATCCATCCTCATGCCTCGGGCCTGATGGAAAAGGATCTGGATGCGGCGACGCGCGGACGGGCGGACGGCATCGTGCTTCCGGGCGTGCGGGCGGCGGCCGATATCCAGCGGCTCGACGCCATGCTGTCGGCCCGCGAGGCGATCTTCGGCATCCATCCGGGCATGACGCGCATCGTTGCGCTCTGCGGCGACAATGCGCTCGGCATCCTCAACACCGGCGAGAACATGGGCCGCGCCTCGCCGCGCCTGGATGCGCTGGGCTGGTCGATGCCGGCGCTGGCCGGAAGCCTCGGCGCCTGCCGCACCCATGAGGATGACGGACGCCTGAGCGATGCCCTGCGGCTTGCCCGCGCCGCCGTGCTGACGGCTGCGGCAGCGGCCGGCATCGGCGCCATCGACTCCGCCTCCGGCCTGTTCGGCAGCGACCGCCTGGCACGCGATTGCCGTGAGGCCAAGGCCGATGGCTTCACCGGAAAGTTCGCCCTGCACAAGACGCAACTGCCCATCGTCAACGCTCTCTTCACCCCGGACCGCAACGAGATTGCCCGCGCCCGCGCCATTGTCGATCTCTTCGAAACCGCCGACCGCGGCACCTGCTTTGCTCCCGATGGCCGCGCGCTCGGCGAAGTCGATCTGCGTCGCGCCCGCCGCCTTCTCGAACATGCCGGGCCGGAGGCCGAAGCTTGA
PROTEIN sequence
Length: 296
MMKRSWLLVPGLDKALLGDSRQSGADVLVADLASVVPPLKAQAREATQQFLSDRPAIREREARCFVLIHPHASGLMEKDLDAATRGRADGIVLPGVRAAADIQRLDAMLSAREAIFGIHPGMTRIVALCGDNALGILNTGENMGRASPRLDALGWSMPALAGSLGACRTHEDDGRLSDALRLARAAVLTAAAAAGIGAIDSASGLFGSDRLARDCREAKADGFTGKFALHKTQLPIVNALFTPDRNEIARARAIVDLFETADRGTCFAPDGRALGEVDLRRARRLLEHAGPEAEA*