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SCN18_10_11_15_R1_B_scaffold_400_8

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5430..6023)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FDT8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 196.0
  • Bit_score: 333
  • Evalue 9.50e-89
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 196.0
  • Bit_score: 333
  • Evalue 1.30e-88
rplY; 50S ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 197.0
  • Bit_score: 330
  • Evalue 2.30e-88

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGCCACGCATCTTACGAGCTCAAGGCCGAGGCGCGCGAACGGGTCGGTAAGGGGTCCTCCCGTGAACTTCGCCGCAACGGTTTCATTCCCGCTGTCATCTATGGTGACAAGCAGGCCCCGATTTCCATCGCGCTGTCGACCAACGAAGTCACCAAGCGCATCCATGGCGGTGGTTTCATGACCACGGTTGCCGTCATCGACGTCAACGGCGAGAAGATCCGCGTCCTGCCGAAGGACTATCAGCTGGATCCGGTGCGCGACTTCACCATGCATGTCGACTTCCTGCGCGTCTCCGCCGACAGCCAGGTCACGGTTCAGGTTCCGGTTCACTTCGTCAACGAAGAGAAGTCGGCCATCAAGACCGGCGCCGTGCTGAACGTCGTTCGTCACGAAGTCGAGCTGCACGTTCCGGCCAACGACATCCCGGAATTCATCACCGTCGACCTGTCAGGCTTCAAGGTCGGCGATGCCGTTCACATCTCGCATGTGAAGCTGCCAGCCAACGCCTCGCCCGTCATCGGCGACCGCGACTTCACGATCGCAACGATCGTTGCCCCGGCCGGCGGCATGGCGGAAGAAGCCAGCGAGTAA
PROTEIN sequence
Length: 198
MSHASYELKAEARERVGKGSSRELRRNGFIPAVIYGDKQAPISIALSTNEVTKRIHGGGFMTTVAVIDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSADSQVTVQVPVHFVNEEKSAIKTGAVLNVVRHEVELHVPANDIPEFITVDLSGFKVGDAVHISHVKLPANASPVIGDRDFTIATIVAPAGGMAEEASE*