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SCN18_10_11_15_R1_B_scaffold_400_30

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(24095..24310)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=9 Tax=Rhizobium/Agrobacterium group RepID=A9CI66_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 145
  • Evalue 1.30e-32
Cold shock protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 145
  • Evalue 3.80e-33
Cold shock protein {ECO:0000313|EMBL:EGP56413.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 145
  • Evalue 1.90e-32

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCGAGACTGGCACTGTAAAATTCTTCAATACCGATAAGGGCTTCGGCTTCATCAAACCGGACAACGGTGGCGCCGATATCTTCGTGCATATTTCCGCCGTTCAGGCTTCCGGCCTGTCGGGACTGTCTGAAAACCAGAAGGTAAGCTTCGACACGGAACCGGATCGTCGTGGCAAGGGCCCGAAGGCCGTCAATCTGCAGATCGCCGGCTGA
PROTEIN sequence
Length: 72
MAETGTVKFFNTDKGFGFIKPDNGGADIFVHISAVQASGLSGLSENQKVSFDTEPDRRGKGPKAVNLQIAG*