ggKbase home page

SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

SCN18_10_11_15_R1_B_unknown_63_17
In projects: SCN18_10_11_15_R1_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy:

Description

SCN18_10_11_15_R1_B_abawaca_073

Displaying items 101-108 of 108 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_10_11_15_R1_B_scaffold_6565
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (80%)
5 3555 bp 60.96 24.73 74.60
SCN18_10_11_15_R1_B_scaffold_13625
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
4 1912 bp 58.53 3.37 72.80
SCN18_10_11_15_R1_B_scaffold_12061
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
4 2125 bp 54.68 7.62 71.44
SCN18_10_11_15_R1_B_scaffold_3874
Order: Rhizobiales (55.56%)
9 5514 bp 55.06 12.95 68.12
SCN18_10_11_15_R1_B_scaffold_24944
Phylum: Proteobacteria (66.67%)
3 2040 bp 62.99 24.56 67.94
SCN18_10_11_15_R1_B_scaffold_14233
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1840 bp 61.20 6.93 64.89
SCN18_10_11_15_R1_B_scaffold_28189
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
2 1023 bp 59.14 6.60 56.01
SCN18_10_11_15_R1_B_scaffold_27418
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1048 bp 58.49 5.87 44.08
Displaying items 101-108 of 108 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.