ggKbase home page

SCN18_10_11_15_R1_B_scaffold_364_21

Organism: SCN18_10_11_15_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_12

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 19751..21886

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding domain 1 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZD3_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 739.0
  • Bit_score: 963
  • Evalue 8.90e-278
peptidoglycan binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 739.0
  • Bit_score: 963
  • Evalue 2.50e-278
Peptidoglycan-binding domain 1 {ECO:0000313|EMBL:ABD89503.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 739.0
  • Bit_score: 963
  • Evalue 1.20e-277

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2136
ATGCGGAAGGACTCGACTGGCCGACATGCAATGAGCCGTGGTGGATTTGACCGCGTGCTGATGGCCGTGGCGGCGACATTCCTGACGGTTTCGGCCTCGAACGCATTCGCGCAGACCGCCCCGGCGCAAAACAATGCCGCCGAACTGGCGATCGATGCCGCGGTTCCCGTACCCGACACCAGCATCGTGCCGCCGCCCACCGCCGCCGATATCGCCGCGACGCCATCGAATGCGGCAGCAAGCACCTCCGCCTCTCCCGCATCGGCCGACAAGACCGAAACCACCGCGAGCACAACGTCCGCGACCGCACCGGCGGCCAGCGTGACGGCGCCTGCCGCTCCGTCCGACACCGCCCAGCAGGCCAAGGAGCCGGCTGCCGCTCCCGCCGCCGAAGCCCCCGCGAAGACCGCCAGCAAGGTCGCTCCGGCCGATCAACCGGTCGCCGAAAAGCTGCGCGACACGCTGCAAACCCAGGCCGCAAAATTCTTCGATCGCAAGAACGAACGCGCCGCCGTGGAGAAGTTCTACGCCGCGCGCGATTACGCGCCGCTGTGGACCGAGGGCGGCGCCCTCACCGCACGGGCCAAGAGCGTCGTGTCGCGCCTTAACGATGCCGCCGCCGACGGCCTCAACCCGGCCGAATATCCGGTGCCCAATTTCGGCACCGCGACCGGCCCCGATGCCTTGGCGGAAGCCGACCTCAAGCTGACCGCCAGCATGCTGGACTACGCACGTCAGGCGCAGAGCGGCCAGATGCACTGGTCGCAGGTCAGCGCCGACATTCAATATCCAGAACACCCGGTCGATCCCAACGAGGTGCTTGCCAACGTCTCGGCGGCGAAGGACGCCTCAGTAGCGCTGCAAGCCTATAACCCGCCGCAAAAGCTCTACAAGGAACTGCGCACCAAGCTCGCCGAATTGCGCGGCCAGTCCGAAGGTCCGGTGACGCTGCTGCCGGAAGGTCCGAAGCTCTCGCTTGCCCGAAAGACCAAGAAGAATCCGCATCCGGTCGCGATGGAAGATGACCGCGTGCCGCAACTGCGCGCCAAGCTCGGCGTCACCGAAAATCCCGACGATACCCACTATGACGCCACCGTCGCCGCGGCTGTCCGCAAATTTCAGGCTCATGCCGGCCTGAAGGCGACCGGCGTGCTCGACGACCACACCGTGAAGGCCATCAACAGCCCGAAGCGGGATCGCGAGATCGATACCATTATCGTCAACATGGAGCGCTGGCGCTGGTTGCCGCGCCAGCTCGGCGCGCCGTCGCTCGGCAATGCCTATGCCATCCTCAACATTCCGGATTTCACCCTGAAGGTGATGCACAACGGCGCTGAGGTCTGGAAGACCCGCGTGGTGGTCGGCAAGCCGGGCAAGCACGCCACGCCGCTCCTGACCGAGACGATGAAATACATTACGGTCAACCCGACCTGGAACGTGCCGCCGTCGATCATCAACAACGAGTACCTGCCGGCCTTGCAGCAGGACCCGACCGTGCTCGACCGCATGGGGCTGAAGCTGCAACAGAACCGCGACGGCACCATCCACATTTCGCAGCCGCCGGGCGAACGCAACGCGCTGGGCCGCATTCGCTTCAACTTCCCGAACAAGTTCCTGGTGTATCAGCACGACACGCCGGACAAGAACCTGTTCTCGCGTGACGTCCGCGCATTCAGCCACGGCTGCATGCGAGTGCAGAACCCCGATCAATATGCGGCGGTGCTGCTGAACATCGCGATGCCGAACGAGCATTACACGCCGGAGAAAATCCGCTCGATGTACGGCAACAGCGAACGCGACATCAAGTTCGCGACGCCGATCCCGGTGAACATCACCTACCAGACCGCGTTCGTCGACGATGCCGGCAAGCTGCATACCCGCAGCGACATCTACGGGCGCGACTCGGCCATGCTGGCGCTGCTGCGCAACAGCAAGAACAAGAACCTCGAAGCGGTGGTGGCTCACGCCCAGCCGAACTACTCGCGGCCACGAGCCCAGCTCCCGGTCGCGGCGAACGACCGCGGCGGGTTCGGCTATGACAGCGGACCGAATTTCTTCGAGCGGCTGTTCGGCATCCCCACCCAGGCCCCGCCGCCGGCCGCCGAATATGGTCAGCGCCGGAGAATTTATCGCTAG
PROTEIN sequence
Length: 712
MRKDSTGRHAMSRGGFDRVLMAVAATFLTVSASNAFAQTAPAQNNAAELAIDAAVPVPDTSIVPPPTAADIAATPSNAAASTSASPASADKTETTASTTSATAPAASVTAPAAPSDTAQQAKEPAAAPAAEAPAKTASKVAPADQPVAEKLRDTLQTQAAKFFDRKNERAAVEKFYAARDYAPLWTEGGALTARAKSVVSRLNDAAADGLNPAEYPVPNFGTATGPDALAEADLKLTASMLDYARQAQSGQMHWSQVSADIQYPEHPVDPNEVLANVSAAKDASVALQAYNPPQKLYKELRTKLAELRGQSEGPVTLLPEGPKLSLARKTKKNPHPVAMEDDRVPQLRAKLGVTENPDDTHYDATVAAAVRKFQAHAGLKATGVLDDHTVKAINSPKRDREIDTIIVNMERWRWLPRQLGAPSLGNAYAILNIPDFTLKVMHNGAEVWKTRVVVGKPGKHATPLLTETMKYITVNPTWNVPPSIINNEYLPALQQDPTVLDRMGLKLQQNRDGTIHISQPPGERNALGRIRFNFPNKFLVYQHDTPDKNLFSRDVRAFSHGCMRVQNPDQYAAVLLNIAMPNEHYTPEKIRSMYGNSERDIKFATPIPVNITYQTAFVDDAGKLHTRSDIYGRDSAMLALLRNSKNKNLEAVVAHAQPNYSRPRAQLPVAANDRGGFGYDSGPNFFERLFGIPTQAPPPAAEYGQRRRIYR*