ggKbase home page

SCN18_30_10_14_R1_B_scaffold_3843_2

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: 1634..1900

Top 3 Functional Annotations

Value Algorithm Source
Putative Xre family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJE5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 80.0
  • Bit_score: 129
  • Evalue 9.30e-28
putative Xre family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 80.0
  • Bit_score: 129
  • Evalue 2.60e-28
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:BAK64815.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 80.0
  • Bit_score: 129
  • Evalue 1.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGATGACATCCGCCCAGATGCGCGCGGCGCGCGCCTTGCTCGGCATCGACCAGCGCCAGCTTGCCGAGCTTTCCGGCGTCTCCCTGCCCACCGTGCGGCGGATGGAGACGAGCGACGGCAATGTGCGCGGCAATGTCGACAGTCTGGTCAAGGTGGTCGAGGCCTTTCAGCGCGCCGGGGTCGAGCTGATCGGCGAGGATATGCAGAGCCCGGAGGGCGGACGCGGCGTGCGCCTGCGCCAGTCCGGGCGGAGGGAGGCGTCATGA
PROTEIN sequence
Length: 89
MMTSAQMRAARALLGIDQRQLAELSGVSLPTVRRMETSDGNVRGNVDSLVKVVEAFQRAGVELIGEDMQSPEGGRGVRLRQSGRREAS*