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SCN18_30_10_14_R1_B_scaffold_3843_5

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: comp(4873..6369)

Top 3 Functional Annotations

Value Algorithm Source
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 499.0
  • Bit_score: 844
  • Evalue 5.90e-242
Cysteine--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJE8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 499.0
  • Bit_score: 844
  • Evalue 4.20e-242
cysS; cysteinyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 499.0
  • Bit_score: 844
  • Evalue 1.20e-242

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1497
ATGACCGAGCCTTCCCTGCGCCTGTTCAACAGCCTGACCCGCGCGGTCGAGCCGTTCGTCCCCGTCCATCCCGGCGAGGCCCGGGTCTATACCTGCGGGCCGACCGTTTATAATTACCAGCATATCGGCAACATGCGCGCCTTCGTGTTCGCCGATACGCTGGGGCGTACGCTCGCCTTCAAGGGCTACAAGCTGCGCCACATCATCAACATCACCGATGTGGGCCACCTGACCTCGGACGCCGACGAGGGCGACGACAAGATGGAGAAGGCGGCAGCGCGCCTGGGCAAGACCGCCTGGGACATCGCGGCCTTCTACACGGCCGAGTTCAAGCGGGACCTCAAATGGCTGAACGTGCGCGATCCCGCGCGCTGGACGGTCGCGACCGACTATGTGCCGCAGATGATCGAGGTGGCCAAGGCAATCGCGGACAAGCATTGCTACGAGCTGCCCTCCGGACTCTATTTCGATATCTCGACGGTGGCCGACTATGGCCGCCTCGCCCGCGCCGCAACCGAGGAAGGCGAGGGCCGGATCGACGAGGTGGAAGGCAAGCGCCACGCGGCCGACTTCGCCATCTGGCGCAAGACGCCGCCGGGCGAGACGCGCCAGATGGAATGGGATTCGCCCTGGGGCCGGGGCGCGCCGGGCTGGCACCTGGAATGCTCGGTGATGAGCCGCGCGGAACTGGGCCTGCCGTTCGACATCCACACCGGCGGCATCGACCATCGCGAGATCCACCATCCCAACGAGATTGCCCAGAATCAGGCCATGCAGGGCTTCGACGCGGAGCACGGCCATCTCGATTGCGCGCAGAATAGCGGCGCGCGCCTGTGGATGCACAACAACTTCCTCATCGACCGCGCCGGCAAGATGAGCAAGTCGAGCGGGGACTTCCTGCGCCTGCAATTGCTCCATGATCGCGGCTATCACCCGCTCGCCTTCCGGCTGATGTGCCTGCAGGCGCACTACCGCTCGGAGCTGGAATTCAGCTGGGACAATCTGGCGGCCGCCCTGACCCGACTCAAGCGCATGGTAATGGCGGTGGCGCAGCTCGAGCAGCGCCATGCCGAGCTGGGCGGGGCCGCTCTCCCCCCGCGCGATGCGTTCGGCCCGAAGCTCGCGCCGCTGATCGAGCGATTCGACGCAGCCATCTCCGACGATCTCAATACCGCCGTCGCGCTGACCGTGTTCGACGAGGCTTTGACGCTCAAGAAGGTCGATCCTGCCGAGAAGCTCGCGGCGATCGCCGCGATGGACGCCGTGCTCGGCCTCGATCTGCTCACTCTCGACCGCGCCGATCTGCGCCTGCGCCCCGCCGCCGCGACCATCGCCGAGGCGGACATCGAGGCGGCGCTGGAGAAGCGCAAGGCGGCGCGCGTGGACAAGGATTTTGCTACGTCCGATGCGATCCGCGATTCGCTGATCGCCTCGGGCGTCGAGGTGATGGACGGCGATCCGCTGGGCTGGGAGTGGAGACTGGAGAATGGCGCATAA
PROTEIN sequence
Length: 499
MTEPSLRLFNSLTRAVEPFVPVHPGEARVYTCGPTVYNYQHIGNMRAFVFADTLGRTLAFKGYKLRHIINITDVGHLTSDADEGDDKMEKAAARLGKTAWDIAAFYTAEFKRDLKWLNVRDPARWTVATDYVPQMIEVAKAIADKHCYELPSGLYFDISTVADYGRLARAATEEGEGRIDEVEGKRHAADFAIWRKTPPGETRQMEWDSPWGRGAPGWHLECSVMSRAELGLPFDIHTGGIDHREIHHPNEIAQNQAMQGFDAEHGHLDCAQNSGARLWMHNNFLIDRAGKMSKSSGDFLRLQLLHDRGYHPLAFRLMCLQAHYRSELEFSWDNLAAALTRLKRMVMAVAQLEQRHAELGGAALPPRDAFGPKLAPLIERFDAAISDDLNTAVALTVFDEALTLKKVDPAEKLAAIAAMDAVLGLDLLTLDRADLRLRPAAATIAEADIEAALEKRKAARVDKDFATSDAIRDSLIASGVEVMDGDPLGWEWRLENGA*