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SCN18_10_11_15_R5_B_scaffold_111_12

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 12504..13499

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor, DctP family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSC9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 326.0
  • Bit_score: 444
  • Evalue 8.40e-122
Sialic acid-binding periplasmic protein SiaP {ECO:0000313|EMBL:CEJ15272.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 331.0
  • Bit_score: 622
  • Evalue 1.90e-175
putative TRAP-type C4-dicarboxylate transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 333.0
  • Bit_score: 358
  • Evalue 1.30e-96

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Taxonomy

CN-SCN_Lautropia_15x → CN-SCN_Lautropia_15x → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGACCGTCACACGCCGCAACGCGCTCATCGCCGGCGCAGGCCTTGCCACTTTCGCCGCGACCCCGCTGCGCGCCCAGGCCACCAAGCTGAAATGGGCGCATGTCTACGAGACCAACGAGGCCTATCACACCGAGGCGCAATGGGCCGCCCAGGAGATCGCCAAGCGCACCAACGGCAAATACCAGATCGACGTCTTCCCGGCGTCCCAGCTCGGCAACGAGAACCAGATCAACGAAGGCCTGAGCCTCGGCACCGTCGACATGATCTATACCGGCGTCGCCTTCGCCGGCTCGATCCACAAGCCGATCGCCATCACCAACGCACCCTATGTGCTGCGCGACTACAATCACTGGAAGGCCTATCGCGACTCGCCGCTGTTCCGGCAGATCGCCTCCGGCTACGAGGGCCGCACCCGCCACAAGGTGGCGTCGCTGACCTATTACGGCGCGCGCCATGTCACGGCCAACAAGGCGATCAACAAGCCCGAGGACATGCGTGGCATGAAGCTCCGCGTGCCGCCCGCGCCGCTGTTCCTGATGTTCACCAAATCGGTCGGCGCCAACGCCACGCCGATCGCCTTCGCCGAAGTCTATCTGGCGCTGCAGCAGGGCACGGTCGACGGCCAGGAGAACCCTTTGCCGACCATCATGGCCAAGAAGTTCTACGAGGTTCAGAGCCATATCATGCTGACCGGCCACATCACGGAATCGCTGGTCTCGGTGGTCGGCAGCCATGTCTGGAGCAAGCTCAACGATGCCGAGAAGACGACCTTCCAGGAGGTGCTGATGCAGGCCTCCGCACGGGCTTCCGAAGCGATCCGGACGTCCGAAGGCCAGCTGGCCGACGAGTTCAGGAAGCTCGGCAAGACGGTGATCGAACCGGATCGCGCCGCCTTCCGGGCCGTCGCCATGCCGCTGCACAACGACGCCGCCGCGGGGGCCGGCTGGTCGCGCGCCGAATATGACGCGTTGCAGGCGCTCGCCCCGTCGAGCTGA
PROTEIN sequence
Length: 332
MTVTRRNALIAGAGLATFAATPLRAQATKLKWAHVYETNEAYHTEAQWAAQEIAKRTNGKYQIDVFPASQLGNENQINEGLSLGTVDMIYTGVAFAGSIHKPIAITNAPYVLRDYNHWKAYRDSPLFRQIASGYEGRTRHKVASLTYYGARHVTANKAINKPEDMRGMKLRVPPAPLFLMFTKSVGANATPIAFAEVYLALQQGTVDGQENPLPTIMAKKFYEVQSHIMLTGHITESLVSVVGSHVWSKLNDAEKTTFQEVLMQASARASEAIRTSEGQLADEFRKLGKTVIEPDRAAFRAVAMPLHNDAAAGAGWSRAEYDALQALAPSS*