ggKbase home page

SCN18_10_11_15_R5_B_scaffold_10_2

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(176..670)

Top 3 Functional Annotations

Value Algorithm Source
UPF0178 protein AZC_4000 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=Y4000_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 156.0
  • Bit_score: 233
  • Evalue 8.60e-59
UPF0178 protein BN1110_05562 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 158.0
  • Bit_score: 258
  • Evalue 5.90e-66
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 156.0
  • Bit_score: 233
  • Evalue 2.40e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial → SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGACCGAACCGTCGGGCGCGGCCACGCCGAAGCGCATCACCGTCTTCGTCGATGCCGACGCCTGCCCGGTGAAGGACGAGGTCTATCGGGTCGCCGGGCGTTACGGTCTCGAGGTTCATGTCGTCGCCAACAGCCCGATCGCGGTGCCGCGCGAGCCGTGGATCCATCGCGTCGTGGTCAGCGAAGGGCCTGACATCGCCGATGACTGGATCGCCGAACGCGCGACCCGCGGCGACGTGGTGGTGACCGCCGACATTCCGCTGGCGGCGCGCGGCGTGAAGGCCGGCGCCGTGGTGCTCGCCCCCACCGGCAAGCTGTTCGACGAGACCTCGATCGGCATGTCGCTCGCCACCCGCAACCTGATGGACGGATTGCGGTCGGCCGGCGAGATGACCCGCGGCCCGAAACCGTTCTCGCCACGCGACCGCTCGGCCTTCCTGTCGGCCCTCGACCTCGCGATCACCAGGCTGAAGCGGGCTGGTTTCGGGGGGTGA
PROTEIN sequence
Length: 165
MTEPSGAATPKRITVFVDADACPVKDEVYRVAGRYGLEVHVVANSPIAVPREPWIHRVVVSEGPDIADDWIAERATRGDVVVTADIPLAARGVKAGAVVLAPTGKLFDETSIGMSLATRNLMDGLRSAGEMTRGPKPFSPRDRSAFLSALDLAITRLKRAGFGG*