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SCN18_10_11_15_R5_B_scaffold_10_10

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(8830..9549)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036C00E6 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 235.0
  • Bit_score: 306
  • Evalue 1.50e-80
Transcriptional regulatory protein OmpR {ECO:0000313|EMBL:CEJ15213.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 240.0
  • Bit_score: 416
  • Evalue 2.50e-113
ompR; response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family) similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 235.0
  • Bit_score: 303
  • Evalue 3.60e-80

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGTCCACTCAGCCGCACATTCTGATCGTCGAAGACGACAACGAGATCAGCAAGCTTCTGACGCGCTACCTGCGCACCAACAACTTCCGGGTGACGGTCGCCCCGGATGGGCGCGAATTCGACCGCCTGCTCGCCGACAATCGTTTCGACCTCCTGATCCTCGACATCATGCTGCCCGGCGAGGACGGATTGAGCCTGTGCCGGAGGGCGCGGGCGGCCAGCGCCATTCCGATCATCATGCTGTCGGCCCGCAGCGAGGATCTCGACCGCATCGTCGGGCTGGAGATCGGCGCCGACGATTATGTCGCCAAGCCGTTCAATCCGCGCGAATTGCTGGCCCGGATCCGGGCGGTGCTTCGCCGCACCAGCGAGGGCTCGGTCGCCGCCCGGCCGCAGGGGCCGCGCAATTACCGCTTTCTCGGCTGGACCATCGACACGGTGCAACGCACCCTGACGGATGCGACCGGCGCGCGGATCGCCATTACCAGCGCCGAATTCGACCTGCTCAACGTTTTCTGCGAAAGGCCGGGCCGCACCCTCAGCCGCGAACAGATCGTCGACCTGACCCAAGGCCGCGCGGTCGGCCCCTATGAGCGCAGCGTCGACATCCTGGTCAGCCGGCTGCGCAGCAAGATCCGCCTCGGCGCCGACGAACCGAGCATCATCGTGACGGTCCGTTCGTCCGGCTACCAGTTCACACCCCAGGTGGATGTCGCGTGA
PROTEIN sequence
Length: 240
MSTQPHILIVEDDNEISKLLTRYLRTNNFRVTVAPDGREFDRLLADNRFDLLILDIMLPGEDGLSLCRRARAASAIPIIMLSARSEDLDRIVGLEIGADDYVAKPFNPRELLARIRAVLRRTSEGSVAARPQGPRNYRFLGWTIDTVQRTLTDATGARIAITSAEFDLLNVFCERPGRTLSREQIVDLTQGRAVGPYERSVDILVSRLRSKIRLGADEPSIIVTVRSSGYQFTPQVDVA*