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SCN18_10_11_15_R5_B_scaffold_233_8

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(5518..6024)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 167.0
  • Bit_score: 247
  • Evalue 1.10e-62
Peptide deformylase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZFR5_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 212
  • Evalue 2.70e-52
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 212
  • Evalue 7.70e-53

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
TTGCCGGCACGCCCGCTCATCACCTATCCCGACGCGCGCTTGCGCCTGAAGGCACTGCCGGTCGACGTCGTCGACGACGGCGTGCGGGAGCTTGCGCGCGACATCCTGGATACGATGGCCGCCGTTTCCGCGGTCGGGCTGACGGCACCCCATATCGGCATCCTGCGGCGCGTCGTCGTCATCCGGCTGGATCCGGCAGCCGAGGCCCTGAACTATGTGAACCCCGAGGTCGTCTGGGCCTCGCCCGAGACAGCGGCCCACAATGAGGGAAGCGTCTCGATGTCCGGTGTCACGGAAGCGGTCGAGCGCCCGGCGCGGATCAGGCTCCGCTATTGGGATCTTGCGGGAGTGGCACGCGAGGACGAGGCCGACGGCTTTCTCGCCGCCTGTCTGCAGCACGAGATCGACCAGCTCGACGGCATGTTCTGGATCGAGCGGCTGTCGCGGCTGAAACGCGAGCGCGTGATCAAGCGCTTCGACAAGCTCGGGCGGCGCGGGCGGGATTGA
PROTEIN sequence
Length: 169
LPARPLITYPDARLRLKALPVDVVDDGVRELARDILDTMAAVSAVGLTAPHIGILRRVVVIRLDPAAEALNYVNPEVVWASPETAAHNEGSVSMSGVTEAVERPARIRLRYWDLAGVAREDEADGFLAACLQHEIDQLDGMFWIERLSRLKRERVIKRFDKLGRRGRD*