ggKbase home page

SCN18_10_11_15_R5_B_scaffold_233_34

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(34251..36332)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator of the SARP family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WHY0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 693.0
  • Bit_score: 499
  • Evalue 3.50e-138
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:EJN12230.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 693.0
  • Bit_score: 499
  • Evalue 5.00e-138
trifolitoxin synthesis, TfuA similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 677.0
  • Bit_score: 453
  • Evalue 8.20e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Rhodobacter_64_50 → SCNpilot_P_inoc_Rhodobacter_64_50 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2082
ATGGGGTTCGGGCGGACGGGCAGTGCGGCGGAACAGTTCGAACGACGACAGGCGGGTGGCCCGGAAGCAATGCTGTCAATCAACATGCTCGGCGGTTGCTCCTTGCTTTACGGCGATCGCCCGGTCGATGTCCGTGGGCGCAAGGCCAAGGCCTGCATGGCCTATCTCGCGCTGCACCACGGCCAGCCCATGTCGCGGGAGCGGCTCGTCGGGCTGCTGTGGAGCGAAACCGGCGAGGATAAGGCACGCGCCTCGCTCAGGCAGACGATCCGGGAATTGCGCGACGCCTTCGATGCCGTCGGATTCACCGGTTTCAACGCCGAGAGGCTCGGGCTCGAGATCCAGGGCGCCGAGGTTAAGGTCGATGCGACCGACCTCTTCCGCAGCCTCGAGGGGGGTGTCATTCCGACCTCGCTGCTCGACCAGCAGCGGGTGGGCGAGACCGTGCTGGCCGGCTATGAGGAGCTCGATCCGGGCTTTCGCATATGGCTCCTGGCCTACCGGCAGACCAGCACCGACCGTCTGATCCGTCATCTCGAAGCCATGATGGAGGGCGCGGTTCCGCCACGTGTCGCGCGCGACGCGGCCCAGGCCTTGCTGAACCTCGACCCGACCCACGAGGTCGCCTGCCGTCACCTGATCCGTGCCCGGGCCGATGCCGGCGACACGGCCGGCGCGCTGAAGATCTACAAGACGCTCTGGGATCTCCTGGAGGCCGATTACGACACCGAGCCCGCGCCGGAGACTCAGGCCCTGGTCGTGTCGATCAAGCGCGGCGACGACCTCGTGGCCATGCCCGGACCGGCCGTGGCGACGGGCCGGCCGGCCAGCGCCGAGCGGCCGCAGATCGCGGTGCCCCAGGTGCGCATGATCGAGCTTGCCGAGCTGCAGACCGACCGGCTGTTGTGCTTCCGCCACGAATTGCTCGCCTGCCTGGTGCGGTTCCGCGAATGGCAGATCGTCGACCATGGCGACATGCAGCGCGTGGCCCAGCCGGCGCTCGACCCCGGCGGGCGCAGCGACAGCGGCTATTACATTGTCGAATCCTCGGCCTATGGCAGCCAGTCGGGTACCCATCTGGTGCTGACTTTGCGCGATTTCGTCAATGCGAGCTATGTCTGGAGCGAACGCTTCGACCTCTCGGCCGCCAATTGGTTCGATGTCCAGCGCGAGATCGCCCGCCGGATCGCGGCCGCGCTCAGGATCAACATTTCGGCCGAGCGCATCACCCGGCTCGCCCACCGGCCGAACCTGCCGGTGGTGTTGCATGACCGCTGGGTGCAGGGCCAGGCCTTGTTCAACGGCTATCGGGCCGACGAATTCGGCCAGGCCGAGCAGATCTTCCGCAATATCACCGAGCGCGACGACGGCTTCTCGCCGGCTTTTTCCAGCTTGGCGCAGTTGAAGAACAGCCGCCACCTCGCCGCGCCGGGCAGCTGGCGTTCGGCCGAGACGGAGGCTGAATCGCTCGCCTTCGCCCAGCGCGCCGCGCAGATCGATCCGATCGATTCGCGGGCGCAGCTCTGCCTCGCCTGGTCGCAGGCCATGGCGGGCATGTATGACGCGGCCCATCCAAGCTTCCAATCGGCCGTGGCGCTCAATGACGGCGATCCCTGGACGCTGACCTCGGCCGCCCATGGCTTCGCCTTTCTCGGCGACATGGACCAGGCAAGGCTCCTGGAACGGCAGATGCTGGATATCGTCCAGATTCCGTCGCGGACCCAATGGGCCTATCTGGTCGGCACCCGCTTCCTGCACGGCGACTATGCCGGCAGTCTCGACGCCGCCCAGGCCGCGCAGGACATCATCTCCAACCTGCCGGGATGGCGGGCCGCGACGCTGCATCATCTCGGGCGCCATGACGAGGCCAGGGCCGAGATGCAGCGCTTCCTGATGCTGATCCGAAACAACTGGCACGGCGCCGAGGCGGCCGACGACGAGGCCATCATCCGCTGGTTCCTGCACAATTTCCCGATTCATCGGCGCGACGACTGGGAGCGCCTGCGCGACGGCGTGCACGGGGCGGGCGCGCCCTTCGTTCATCACGAAGGGCGGCGCCCTGTTCACATTGCCCTCGGCTGA
PROTEIN sequence
Length: 694
MGFGRTGSAAEQFERRQAGGPEAMLSINMLGGCSLLYGDRPVDVRGRKAKACMAYLALHHGQPMSRERLVGLLWSETGEDKARASLRQTIRELRDAFDAVGFTGFNAERLGLEIQGAEVKVDATDLFRSLEGGVIPTSLLDQQRVGETVLAGYEELDPGFRIWLLAYRQTSTDRLIRHLEAMMEGAVPPRVARDAAQALLNLDPTHEVACRHLIRARADAGDTAGALKIYKTLWDLLEADYDTEPAPETQALVVSIKRGDDLVAMPGPAVATGRPASAERPQIAVPQVRMIELAELQTDRLLCFRHELLACLVRFREWQIVDHGDMQRVAQPALDPGGRSDSGYYIVESSAYGSQSGTHLVLTLRDFVNASYVWSERFDLSAANWFDVQREIARRIAAALRINISAERITRLAHRPNLPVVLHDRWVQGQALFNGYRADEFGQAEQIFRNITERDDGFSPAFSSLAQLKNSRHLAAPGSWRSAETEAESLAFAQRAAQIDPIDSRAQLCLAWSQAMAGMYDAAHPSFQSAVALNDGDPWTLTSAAHGFAFLGDMDQARLLERQMLDIVQIPSRTQWAYLVGTRFLHGDYAGSLDAAQAAQDIISNLPGWRAATLHHLGRHDEARAEMQRFLMLIRNNWHGAEAADDEAIIRWFLHNFPIHRRDDWERLRDGVHGAGAPFVHHEGRRPVHIALG*